Gene Cagg_1293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1293 
Symbol 
ID7266279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1592079 
End bp1593395 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content60% 
IMG OID643566135 
Productglutamate-1-semialdehyde aminotransferase 
Protein accessionYP_002462637 
Protein GI219848204 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0001] Glutamate-1-semialdehyde aminotransferase 
TIGRFAM ID[TIGR00713] glutamate-1-semialdehyde-2,1-aminomutase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATTG CTACCGAGCG TTACAGCCGT TCACAGGCCA ACTTTGCCGC AGCTCAAGCT 
GTTATTCCCG GTGGTGTTAA TTCCCCGGTA CGCGCTTTTC GCGGAGTTGG TGGTAGCCCC
ATCTTCTTCG AGCGCGGCCA AGGCGCCCAC ATCTGGGACG TTGATGGTAA CCGGTATATC
GATTACGTGC TCTCGTGGGG ACCACTCTTG CTCGGTCATG CCCACCCGGC GGTTGTCAAC
GCGATTGCCA CGCAAGCCCA ACGCGGAACC AGCTTTGGTG CGCCGACCGA ACTCGAAACC
GACTTAGCCC GGCTTGTGCT CGATCTCGTG CCGTCGATCG AACAGATTCG CTTTGTCAAT
AGCGGCACCG AAGCCACGAT GAGTGCGCTT CGGCTTGCCC GTGCCGCCAC CGGACGCCGC
CTCATCGTCA AGTTCAACGG CTGCTACCAC GGTCATGCCG ATATGCTGCT CGTGCAGGCC
GGCAGCGGCG TTGCGACCCT TGGCCTACCC GATAGTCCCG GCGTACCGCC AACCGTTGCC
GCCGATACCA TCACCATCGA ATATAACGAT CTCGACGCCG CAGCCGATCT CTTTGCCAGG
CGTGGCAGCG AGATTGCCGC CGTGATCGTC GAGCCGATTG CCGCCAATAT GGGATTTGTC
CTTCCCAAAC CCGGTTTCCT CAGCGGTCTC CGCGAACTCA CCCAACAGCA CGGTGCCATC
TTCATTCTCG ATGAGGTCAT GACCGGTTTT CGGGTTGCCC CTGGCGGCGC CCAAGCCCTC
TGGAACCTCG ATCCCGATCT TACCTGTTTG GGAAAAGTGA TCGGTGGCGG CCTACCGGTC
GGCGCGTATG CCGGTAAGCG CCATTTGATG CAGTTGGTCG CACCGGCCGG CCCGATGTAT
CAGGCCGGTA CCCTGAGTGG CAACCCGCTG GCAATGATCG CCGGCCTGAC CACGCTCCGC
ACCGCGTTTA CCGACGACAA CACCGCTTTT CAGCGGGCTG TTACGCTCAC CACCCGACTT
GCGAACGGTT TGCGCGAATT GGGTGAACGC TATCGCATTC CATTACAAGT CGGCAATGTG
GGTACGATGT TCGGTTGCTA CTTCCTGCGT CACGCCGATG CGCAGATCAC CAACTACGTT
GAAGCGAAAG CCAATGCTGA CACCCAACGG TATGCTCGCT TCTTCTGGGC AATGGCCGAC
CGCGGCATCT ACCTTGCCCC CTCACAGTTT GAGGCCGGCT TTGTCAGCAC TGCTCATACC
GACGCCGACA TCGACCAGAC GCTGACCGCA GTGGAGGAAG CGTTCGCCCA ACTGTAA
 
Protein sequence
MTIATERYSR SQANFAAAQA VIPGGVNSPV RAFRGVGGSP IFFERGQGAH IWDVDGNRYI 
DYVLSWGPLL LGHAHPAVVN AIATQAQRGT SFGAPTELET DLARLVLDLV PSIEQIRFVN
SGTEATMSAL RLARAATGRR LIVKFNGCYH GHADMLLVQA GSGVATLGLP DSPGVPPTVA
ADTITIEYND LDAAADLFAR RGSEIAAVIV EPIAANMGFV LPKPGFLSGL RELTQQHGAI
FILDEVMTGF RVAPGGAQAL WNLDPDLTCL GKVIGGGLPV GAYAGKRHLM QLVAPAGPMY
QAGTLSGNPL AMIAGLTTLR TAFTDDNTAF QRAVTLTTRL ANGLRELGER YRIPLQVGNV
GTMFGCYFLR HADAQITNYV EAKANADTQR YARFFWAMAD RGIYLAPSQF EAGFVSTAHT
DADIDQTLTA VEEAFAQL