Gene Cagg_1290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1290 
Symbol 
ID7266276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1589041 
End bp1589805 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content62% 
IMG OID643566132 
ProductUroporphyrinogen III synthase HEM4 
Protein accessionYP_002462634 
Protein GI219848201 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1587] Uroporphyrinogen-III synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTGC TTGTAGGTCG TCGGATAGCC ATCACCCGTC CGGCAGGCCG CGGCGATACA 
CTCGCTGCAC GATTGCGCGC ACTCGGCGCC ATTCCGTTAC TCACGCCGCT CATCGCGTAT
GCACCACCTG CCGATCCGGC CCCACTGCAA CACGCGCTGG CCCAACTCGC TGCCGGCACG
TATGATTGGC TCGTGGTCAC AAGCCGGCAA GCGGTCCAAG TGTTAGCCGA GGCCACAGTG
CCGACAACCA CAGCCATCGC TGCTGTTGGG AAGGCAACCG CTGCCGATTG CCGCCGCACC
TGGGGGCGCG AACCGGCCGG TGTACCTGAT GAGGAACTCG GAGCCGCGCT ACCGAACGTT
ATGGGCACGC TCACCGGGAA GCGGATATTG CTGCCGTGCG CCGACATTGC CCCATCAACA
CTGACCGCAG CACTCCAAGC AGCCGGTGCA ATTGTTGATC GGGTAACTGC CTACCGCACG
ATCAGTAGTC CGGCTGCCGC CGAACTCGCC GCTGCGCTAC GGAGCGGTAC GATTGATGCA
ATTGTACTGG CCAGCGGATC GGCCGCTCGC CAAATACCGG CCCTCTTGCC GCCACAAACT
CAGTGTCCAC CATTAGTCTG CATTGGGCCG AGTACTGCTG CCGTCTGCAC AGAATTGGGA
CTACCGGTTG CCGCCATCGC TATACGCCCC AACGACGATG CATTGCTGGC GGCGTTGGAA
CGGGTTTTTC TCAGTCAGGA TGCGCAACCT GTGAGCGGGT TTTGA
 
Protein sequence
MSVLVGRRIA ITRPAGRGDT LAARLRALGA IPLLTPLIAY APPADPAPLQ HALAQLAAGT 
YDWLVVTSRQ AVQVLAEATV PTTTAIAAVG KATAADCRRT WGREPAGVPD EELGAALPNV
MGTLTGKRIL LPCADIAPST LTAALQAAGA IVDRVTAYRT ISSPAAAELA AALRSGTIDA
IVLASGSAAR QIPALLPPQT QCPPLVCIGP STAAVCTELG LPVAAIAIRP NDDALLAALE
RVFLSQDAQP VSGF