| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_1281 |
|---|
| Symbol | |
|---|
| ID | 7266267 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | - |
|---|
| Start bp | 1575644 |
|---|
| End bp | 1577404 |
|---|
| Gene Length | 1761 bp |
|---|
| Protein Length | 586 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643566123 |
|---|
| Product | diguanylate cyclase with GAF sensor |
|---|
| Protein accession | YP_002462625 |
|---|
| Protein GI | 219848192 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2199] FOG: GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATGGTT CTTGTCAGCT TGCGGTACTG GTTTCACCGT CCGGTGAGGT AGTAGCTTGC
AGCGAAGCCC TACGTCCATT ATTACCTGAC GTTACTCCTC TCTTACCTGA TCTGGTGCAT
GCTGAGCCGG AAAACGAAGT ATTGTTGCAA GGTCGTCGTT ATACCGTTAC CCGCCAACCG
TTGTTGAACG AAGCAGGCAC GACGTTTGCC TTCCTGATCG CTTTGCAAGC CGTGTCTGTT
CGCCGTGCCG ATCATCGGTT AAGCGAGATG GTGATTGCTA TTTCGAGTAA GCTCGATATC
GAACACGTGT TGGAGCAAGT GGTGCGTTTT GCGATGGAGC TGCTCGACGC CGATGCCGGT
TCGTTGCCGC TCTACGATCC CGAACGTGAA CGGTTAACCA TCGGCCATCT GGTCAACCTG
CCGGTTAATA CCCTTACTCC GATTGTGACA CAGCGGCGTG GTTTGATGTG GCAGCTCATC
AAGCAACGAA CGTCGATTCT TATTGCCGAT TATCCCAACC ATCCGGTAGC GCTGCCCGAA
CTGGTTCATC GTGGGGTGCG CTCATTACTG GCAACATCGA TCGTCTATGG CAATACACCG
TTGGGGATTC TCGCCCTCTA CCGTATGCGT GATGAGCCGT TCCAGGAATC GGATCGTGAC
ATCTTGCAGG CCATTGCCCT CCAGACGGCG ATTGCTCTGC ATAGTTCACG AATGTATCAG
CGGGCTATGC GCAATGCCGA TGAGCGGTAT GCGCTGTACC AGGCTAGTCT GGAGATGGGG
GCTACCCTCG ACCTCGAACA ACTGTATCAA GCCATTCATC GTGCTGTATC GCGTCTGGTT
CGTCATAGCC GATTTATGAT TGCAACGCTC GTCGATCAAC GGACGGCCGA ATATGTCTAT
GTGTATACAC CAGATGGTCG TCAACCGGTA CAACGCTGGC CGGTGACACA CGGCTTAGCC
GGCTATGTTT TACGGTTTGG GGTATCGTTG CGCTTATCAG GTGCGCAGAT GCTAGCGGTG
CCCGGCGCCC AGCCATTGCC CGAGCTTGAA GGCAATCTGG CAGAGGGATC GTTTATGGCA
ACACCGTTGA TCGTTGATGA TCGTATCATT GGTGCGTTGG TTGTCGGTAG CGATCAGCGC
GATGTCTATG CGATGTCCGA TCTGAGCGCA CTCGAATTGC TGGCCGCAAC CGTTGCAGGA
GCATTGCACA ACGCCATGCG CTTTGCCCAC ATCCAGTCGT TGACGATTAC TGATGTGTTG
ACCGAACTGG TGAATCGCCG GCATTTCTTC CAAATCCTCC ACCACGAGAT CGAGCGGTCG
CGCCGTTATC GCACACCGGT GAGCATTGCG ATGATTGATC TCGACCATTT TAAGCAGGTG
AACGACACAT ACGGTCATGT CGTCGGTGAT AAATTGTTAC GCGAGGTAGC CTTGCGTTGC
CGTCGGTATG TGCGTGATGT CGATATTTTG GCCCGCTATG GTGGCGAGGA ATATGGCTTG
ATCTTGCCGG AAACACGATA CGAATCGGCT TTGTTGGCTG CCGAGCGGTT GCGTCAGCAT
GTCATGTCCG TCCCTTTTAC CATTGATGGT CATCTCATCT CGATGACCTT GAGTATTGGG
GTTGCCAGTT TTCAGGCCGA TGTTCATCCT GATCCATCTT CATTAGTCGT TGATGCCGAC
CGGGCGCTTT ACCTGGCCAA ACAACGTGGG CGCAATTGTG TCTGCGGCAC GAAGGAGTTG
TCTCGCTATG CCGAACCCTG A
|
|---|
| Protein sequence | MDGSCQLAVL VSPSGEVVAC SEALRPLLPD VTPLLPDLVH AEPENEVLLQ GRRYTVTRQP
LLNEAGTTFA FLIALQAVSV RRADHRLSEM VIAISSKLDI EHVLEQVVRF AMELLDADAG
SLPLYDPERE RLTIGHLVNL PVNTLTPIVT QRRGLMWQLI KQRTSILIAD YPNHPVALPE
LVHRGVRSLL ATSIVYGNTP LGILALYRMR DEPFQESDRD ILQAIALQTA IALHSSRMYQ
RAMRNADERY ALYQASLEMG ATLDLEQLYQ AIHRAVSRLV RHSRFMIATL VDQRTAEYVY
VYTPDGRQPV QRWPVTHGLA GYVLRFGVSL RLSGAQMLAV PGAQPLPELE GNLAEGSFMA
TPLIVDDRII GALVVGSDQR DVYAMSDLSA LELLAATVAG ALHNAMRFAH IQSLTITDVL
TELVNRRHFF QILHHEIERS RRYRTPVSIA MIDLDHFKQV NDTYGHVVGD KLLREVALRC
RRYVRDVDIL ARYGGEEYGL ILPETRYESA LLAAERLRQH VMSVPFTIDG HLISMTLSIG
VASFQADVHP DPSSLVVDAD RALYLAKQRG RNCVCGTKEL SRYAEP
|
|---|
| |