Gene Cagg_1281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1281 
Symbol 
ID7266267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1575644 
End bp1577404 
Gene Length1761 bp 
Protein Length586 aa 
Translation table11 
GC content54% 
IMG OID643566123 
Productdiguanylate cyclase with GAF sensor 
Protein accessionYP_002462625 
Protein GI219848192 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGGTT CTTGTCAGCT TGCGGTACTG GTTTCACCGT CCGGTGAGGT AGTAGCTTGC 
AGCGAAGCCC TACGTCCATT ATTACCTGAC GTTACTCCTC TCTTACCTGA TCTGGTGCAT
GCTGAGCCGG AAAACGAAGT ATTGTTGCAA GGTCGTCGTT ATACCGTTAC CCGCCAACCG
TTGTTGAACG AAGCAGGCAC GACGTTTGCC TTCCTGATCG CTTTGCAAGC CGTGTCTGTT
CGCCGTGCCG ATCATCGGTT AAGCGAGATG GTGATTGCTA TTTCGAGTAA GCTCGATATC
GAACACGTGT TGGAGCAAGT GGTGCGTTTT GCGATGGAGC TGCTCGACGC CGATGCCGGT
TCGTTGCCGC TCTACGATCC CGAACGTGAA CGGTTAACCA TCGGCCATCT GGTCAACCTG
CCGGTTAATA CCCTTACTCC GATTGTGACA CAGCGGCGTG GTTTGATGTG GCAGCTCATC
AAGCAACGAA CGTCGATTCT TATTGCCGAT TATCCCAACC ATCCGGTAGC GCTGCCCGAA
CTGGTTCATC GTGGGGTGCG CTCATTACTG GCAACATCGA TCGTCTATGG CAATACACCG
TTGGGGATTC TCGCCCTCTA CCGTATGCGT GATGAGCCGT TCCAGGAATC GGATCGTGAC
ATCTTGCAGG CCATTGCCCT CCAGACGGCG ATTGCTCTGC ATAGTTCACG AATGTATCAG
CGGGCTATGC GCAATGCCGA TGAGCGGTAT GCGCTGTACC AGGCTAGTCT GGAGATGGGG
GCTACCCTCG ACCTCGAACA ACTGTATCAA GCCATTCATC GTGCTGTATC GCGTCTGGTT
CGTCATAGCC GATTTATGAT TGCAACGCTC GTCGATCAAC GGACGGCCGA ATATGTCTAT
GTGTATACAC CAGATGGTCG TCAACCGGTA CAACGCTGGC CGGTGACACA CGGCTTAGCC
GGCTATGTTT TACGGTTTGG GGTATCGTTG CGCTTATCAG GTGCGCAGAT GCTAGCGGTG
CCCGGCGCCC AGCCATTGCC CGAGCTTGAA GGCAATCTGG CAGAGGGATC GTTTATGGCA
ACACCGTTGA TCGTTGATGA TCGTATCATT GGTGCGTTGG TTGTCGGTAG CGATCAGCGC
GATGTCTATG CGATGTCCGA TCTGAGCGCA CTCGAATTGC TGGCCGCAAC CGTTGCAGGA
GCATTGCACA ACGCCATGCG CTTTGCCCAC ATCCAGTCGT TGACGATTAC TGATGTGTTG
ACCGAACTGG TGAATCGCCG GCATTTCTTC CAAATCCTCC ACCACGAGAT CGAGCGGTCG
CGCCGTTATC GCACACCGGT GAGCATTGCG ATGATTGATC TCGACCATTT TAAGCAGGTG
AACGACACAT ACGGTCATGT CGTCGGTGAT AAATTGTTAC GCGAGGTAGC CTTGCGTTGC
CGTCGGTATG TGCGTGATGT CGATATTTTG GCCCGCTATG GTGGCGAGGA ATATGGCTTG
ATCTTGCCGG AAACACGATA CGAATCGGCT TTGTTGGCTG CCGAGCGGTT GCGTCAGCAT
GTCATGTCCG TCCCTTTTAC CATTGATGGT CATCTCATCT CGATGACCTT GAGTATTGGG
GTTGCCAGTT TTCAGGCCGA TGTTCATCCT GATCCATCTT CATTAGTCGT TGATGCCGAC
CGGGCGCTTT ACCTGGCCAA ACAACGTGGG CGCAATTGTG TCTGCGGCAC GAAGGAGTTG
TCTCGCTATG CCGAACCCTG A
 
Protein sequence
MDGSCQLAVL VSPSGEVVAC SEALRPLLPD VTPLLPDLVH AEPENEVLLQ GRRYTVTRQP 
LLNEAGTTFA FLIALQAVSV RRADHRLSEM VIAISSKLDI EHVLEQVVRF AMELLDADAG
SLPLYDPERE RLTIGHLVNL PVNTLTPIVT QRRGLMWQLI KQRTSILIAD YPNHPVALPE
LVHRGVRSLL ATSIVYGNTP LGILALYRMR DEPFQESDRD ILQAIALQTA IALHSSRMYQ
RAMRNADERY ALYQASLEMG ATLDLEQLYQ AIHRAVSRLV RHSRFMIATL VDQRTAEYVY
VYTPDGRQPV QRWPVTHGLA GYVLRFGVSL RLSGAQMLAV PGAQPLPELE GNLAEGSFMA
TPLIVDDRII GALVVGSDQR DVYAMSDLSA LELLAATVAG ALHNAMRFAH IQSLTITDVL
TELVNRRHFF QILHHEIERS RRYRTPVSIA MIDLDHFKQV NDTYGHVVGD KLLREVALRC
RRYVRDVDIL ARYGGEEYGL ILPETRYESA LLAAERLRQH VMSVPFTIDG HLISMTLSIG
VASFQADVHP DPSSLVVDAD RALYLAKQRG RNCVCGTKEL SRYAEP