Gene Cagg_1277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1277 
Symbol 
ID7266263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1567565 
End bp1568626 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content61% 
IMG OID643566119 
Productnicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase 
Protein accessionYP_002462621 
Protein GI219848188 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2038] NaMN:DMB phosphoribosyltransferase 
TIGRFAM ID[TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCTGC TCACGCAAAC TATCAATCAC ATTGGCCCAT TGGATGATCA GGCGGCAACG 
GCAGCTCGCC GCCGGCAAGA CATGCTCACC AAGCCGGCCG GCTCGCTGGG CCGATTAGAG
GAACTCTCGA TCCGGATTGC CGGTATCACC GGACGCGAAC GGCCCCGTCT CACCAAACCG
GCGGTGATCG TGATGGCTGC CGATCACGGG GTAGCCCGCC AAGGCGTGAG CGCCTTTCCC
GCCGAGGTGA CGCCGCAAAT GGTGCTGAAC TTTTTACGTG GTGGTGCGGC AATTAATGTG
CTGGCCCGCC ATGTAGGGGC GCAGGTGATT GTAGTGGATA TTGGCGTCGC GGCTGATTTG
CCGTCCCATC CCGAATTGGT CAGCCGCAAA CTTGCTTATG GCACGGCTGA TTTTAGCCAG
GAGCCGGCGA TGAGCCGTGA TCTTGCACAG CAGGCCATCG AGGTGGGGAT TACTTGTGCT
AACGAGGCGA TCGATAGTGG AGTAGACCTG TTAGCCACCG GCGAAATGGG TATTGCCAAC
ACGACGGCAG CGAGTGCGGT GGTGGCGGCA ATTACCGGAA GACCGGTGGC GGAAGTGACC
GGGCGCGGTA CCGGCATTGA TGATGCTAGC TTGGCGCGCA AGATTGCCGT GATCGAGCGA
GCGCTGGTGC TGCACCAACC CAACCCGCGC GATGGTCTCG ATGTGCTGGC GAAAGTGGGT
GGGTTGGAGA TCGGTGGCCT GGCCGGCGTT ATCCTTGGTG CGGCAGCGCG ACGGGTGCCG
GTCGTGATTG ACGGTTTCAT TTCAGGGGCG GCGGCTCTGA TCGCAGCCAC ACTGGCCCCT
GCCGCCGTCA ACTACATGAT CGCCGGTCAC CGCTCGGTCG AACGTGGCCA TGCGGCGGTA
TTCGACCGTC TCGATTTGAA ACCATTGCTC GATCTCGATA TGCGACTCGG TGAAGGTACC
GGTGCTGTGC TGGCAATGTC GCTCTGCCAG GCGGCCTGCA AGGTACTTGA TGAGATGGCT
ACCTTCGCCG AAGCCGGTGT GTCGGAGAAG AAGGAGGCGT AG
 
Protein sequence
MSLLTQTINH IGPLDDQAAT AARRRQDMLT KPAGSLGRLE ELSIRIAGIT GRERPRLTKP 
AVIVMAADHG VARQGVSAFP AEVTPQMVLN FLRGGAAINV LARHVGAQVI VVDIGVAADL
PSHPELVSRK LAYGTADFSQ EPAMSRDLAQ QAIEVGITCA NEAIDSGVDL LATGEMGIAN
TTAASAVVAA ITGRPVAEVT GRGTGIDDAS LARKIAVIER ALVLHQPNPR DGLDVLAKVG
GLEIGGLAGV ILGAAARRVP VVIDGFISGA AALIAATLAP AAVNYMIAGH RSVERGHAAV
FDRLDLKPLL DLDMRLGEGT GAVLAMSLCQ AACKVLDEMA TFAEAGVSEK KEA