Gene Cagg_1268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1268 
SymbolcbiD 
ID7266254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1559785 
End bp1561020 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content60% 
IMG OID643566110 
Productcobalt-precorrin-6A synthase 
Protein accessionYP_002462612 
Protein GI219848179 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1903] Cobalamin biosynthesis protein CbiD 
TIGRFAM ID[TIGR00312] cobalamin biosynthesis protein CbiD 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGATA TGGTTCCACC TCGCAACAAA CGCGGTTCGC GCACCGGCTA CACCACCGGC 
AGCAACGCCG CCGCCGCTGC CAAAGCTGCC ACGATTGCCC TCTTGAGTGG CCGCTGGCCG
GAACAGGTGA CGATTACCTT ACCGATCGGC GAGACGGCCA CAATGACACC GGTCGTTACC
CAGTTTGATG CCGAAAGTGC ATATTGTTGT ATGCGCAAAG ATGCCGGTGA CGATCCAGAT
GTGACCCACG GTGCGTTGAT CTGCGCGCGG GTGCGGCTTG TGACCACGCC GGGCATCCAT
CTGGAAGGCG GCGAGGGGGT GGGACGGGTG ACGCTGCCCG GTTTGGGTTT GCCGGTCGGC
GGGCCGGCGA TCAATCCGGT GCCGCGCCAG CAGATTACCG CTAATGTACG TGATGCAGTG
CGCGAGTATG CGCCCGACGG TGAGGCGTTT CTCGACCGAC GCGGCTTAGA GGTGGTTATC
AGCGTCCCCG GTGGTGAGCA GATCGCGCAA AAGACGCTCA ACCCGCGCCT CGGCATTATC
GGCGGGATTA GCATTCTTGG CACCACCGGC AAGGTCTTTC CCTATAGCAC CGCCGCGTGG
CGGGCGAGTG TGATTCAAGC GGTGGAGATG GCTGCACGGA ACGGTGTTTC CAAAATTGTT
CTCTGTACCG GTGGCCGTTC CGAAAAGTTT GCCATGCAGA TCTTCCCCGA TTTACCGGAG
ATTGCCTTTG TTGAATTGAG TGTCTTTACC GGTGATGCGC TCAAAACCTG CATTGCCCAC
GGGGTGCCGT CAGCCGTGTT TGTGGGCATG ATCGGCAAGA TGATTAAAAC GGCGCAAGGC
CATATGCAAA CTCACGTTGC CGGTAATCAG GTTGATTTTA CCTTTTTGGC GCAGGTCTGC
CGCGAGGTAG GTGCGCCGGA CGAGTTGGTG CAGGCGGTGG CGCAGGCGAA TACCGGACGC
CATTTTCTTG AGTTGTGCCA GCAGTATGGT CAGCAAGCGC CGTTGCAGCG GATCGTGGAT
TTGGCCCTCG AACAGTGCCT GCGCTTCATT GCCGCCCACG GCGGTGCAAT GGATTTCGAG
ACCATCTTGG TTGATTTTGA TGGCAAGGTG TTGGCACGTG CTGCGGCAGT CGCTGCCGCT
CACGCGCATC CTGCGACTCT GCCGCCCCCG TTGATCGAGC GGTTGCCGAC CGAGCCGTTG
CCCGAAGATG ATACGGTCGT GGAGGGTGAG CCATGA
 
Protein sequence
MADMVPPRNK RGSRTGYTTG SNAAAAAKAA TIALLSGRWP EQVTITLPIG ETATMTPVVT 
QFDAESAYCC MRKDAGDDPD VTHGALICAR VRLVTTPGIH LEGGEGVGRV TLPGLGLPVG
GPAINPVPRQ QITANVRDAV REYAPDGEAF LDRRGLEVVI SVPGGEQIAQ KTLNPRLGII
GGISILGTTG KVFPYSTAAW RASVIQAVEM AARNGVSKIV LCTGGRSEKF AMQIFPDLPE
IAFVELSVFT GDALKTCIAH GVPSAVFVGM IGKMIKTAQG HMQTHVAGNQ VDFTFLAQVC
REVGAPDELV QAVAQANTGR HFLELCQQYG QQAPLQRIVD LALEQCLRFI AAHGGAMDFE
TILVDFDGKV LARAAAVAAA HAHPATLPPP LIERLPTEPL PEDDTVVEGE P