Gene Cagg_1260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1260 
Symbol 
ID7266246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1550189 
End bp1551286 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content58% 
IMG OID643566102 
Productaminotransferase class I and II 
Protein accessionYP_002462604 
Protein GI219848171 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase 
TIGRFAM ID[TIGR01141] histidinol-phosphate aminotransferase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACCGC ACGGAACTGT AGTCCACGGT GCGCTTGATG AAGCTGAGCT GGCAATGCTG 
GGGTTGCATG CCGAACAACT CATTGATTTC AGTAGTAATA TCAATCCCTT TGGCCCACCT
GCAACTGTCT TGGCTGCCTT ACGTGCGCTC AATCCGGCTC CCTATCCCGA CCGAAGCTGT
CTCCGTCTGC GCCAACAGTT GGCGCACCTG CATCATTGTG ATCCGGCTGC GGTGTTAGTC
GGGAATGGTG CCAATGAGCT GATCCATCTC GTGGCGCGAG GGTTGGGGCA GCCCGATACG
ACCGCACTCA TGGTGGCCCC GACCTACGGT GAATACGCCT ACGCTGCCAA CCTTGTTGGC
ATGACAATCG CTGAAGTGCG CAGTACTGCC GCCGATCAGT TTCAACTTGA TCGAACCGCT
CTTATCGCGG CTATCGAACA CTTCCGTCCG CGTCTGCTCT GGCTCTGCTC GCCCAATAAC
CCAACCGGTG TGGCGTTAGA TACGGCGACC ATCCTCGAAT GTGCCCACGT CTGCGCGCGC
TACGATGGTT GGCTGATACT CGACCGGGCT TATCTCTCGC TGACCCGTGA CTACACCGGT
TGCGATCCGC TTGACTCCAT CGCCGTGCCT CGTCTGATCC GTATCTATTC GCTCACCAAA
AGTTATGCCG TGGCCGGGTT GCGGATCGGC TATCTGATTG CTACTCCCGA GGTAGTCAGT
ACAATTGCCC GTTTTCAACC TGCGTGGAGT GTCAGTAGTG CGGCACAGGC GGCGGCGTTG
GCGATGCTGG CCGATCCCGC ATTTTTACCG ACGACACTAC CGCAACTATG GGCTGCCAGC
GATGAATTGG TCGCCGGGTT GCGCCAGCTT GGCTTGAACG TGTGGCGTGC CCAGATGCCC
TTCATGCTGG TGCAAAGCAC CGATGCTACC TTCACCCGCC GACAATTGTT GACCCACGGC
TGTGTAGTTC GTGATTGCAC GTCGTTTGGT TTGCCGGATT GGGTACGGGT CGCGCCACGT
CGTCCGGCAG AAAATGCACG TTTGCTGACG GCATGGCAGG TGCTAATACC GAAGTATGCT
CATACCGGTG ATGTGTAA
 
Protein sequence
MEPHGTVVHG ALDEAELAML GLHAEQLIDF SSNINPFGPP ATVLAALRAL NPAPYPDRSC 
LRLRQQLAHL HHCDPAAVLV GNGANELIHL VARGLGQPDT TALMVAPTYG EYAYAANLVG
MTIAEVRSTA ADQFQLDRTA LIAAIEHFRP RLLWLCSPNN PTGVALDTAT ILECAHVCAR
YDGWLILDRA YLSLTRDYTG CDPLDSIAVP RLIRIYSLTK SYAVAGLRIG YLIATPEVVS
TIARFQPAWS VSSAAQAAAL AMLADPAFLP TTLPQLWAAS DELVAGLRQL GLNVWRAQMP
FMLVQSTDAT FTRRQLLTHG CVVRDCTSFG LPDWVRVAPR RPAENARLLT AWQVLIPKYA
HTGDV