| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_1256 |
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| Symbol | |
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| ID | 7266242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chloroflexus aggregans DSM 9485 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011831 |
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| Strand | + |
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| Start bp | 1542236 |
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| End bp | 1545895 |
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| Gene Length | 3660 bp |
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| Protein Length | 1219 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643566098 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_002462600 |
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| Protein GI | 219848167 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTAA CAGGGCGATT AGCAGGAAAG ATTGCGCTAA TTACCGGCGG TGCAGGGAAC
ATCGGAAGTG AAATGACCCG TCGCTTTCTC GCCGAGGGTG CCACCGTGAT CATCAGCGGA
CGGAACAGCG CCAAACTGGC GGCGTTGGCC GAACGGCTAC GGAGCGAAGC GGGTGTACCG
GCAAAACGGA TCGATCTTGA AGTGATGGAT GGGAGTGATC CGGCGGCGGT GCGTGCCGGC
GTTGCAGCGA TCATTGGTCG ACATGGTCAC ATTGACATTC TGGTTAATAA TGCGGGGAGC
ACCGGCGCCC AACGACGATT GGCCGAGATA CCTCTGAACG AAACCGACCG TGACCTCGAT
GATGAAGAGG CGTTGAGTAC AAGTGTCGCG AATCTCCTGG GCATGGCGTG GCATCTGATG
CGAATTCTCT CCCCCCATAT GCCGCCCGGT AGCGCGATTA TTAACATTTC GACTATCTTT
TCGCGGGCTG AATATTACGG TCGTATTCCT TACGTCGTAC CGAAAGCAGC CCTCAATACG
CTCACCCAAA TTGCAGCACG TGAGCTGGGT ATCCGCGGGA TCCGCGTCAA CACGATCTTC
CCCGGCCCAA TCGAGAGTGA ACGGATTCAG ACCGTCTTTC AACGCATGGA CCAGCTCAAA
GGTCGGCCAG AAGGTGATAC GGCTAGCCAG TTCCTCGCCA CGATGCGGTT GTACCGCGCC
AATGATCAAG GCCAGCTCGA ACGCCGCTTC CCTACCATCT GTGACGTAGC CGATGCAGCA
GTCTTTCTGG CCAGTGATGA AGCAGCGGCC CTGACCGGTG AGACGATAGA GGTGACACAC
GGCATGGAAT TGCCGACCAG CAGTGAAACG AGTCTGCTCG CCCGCACCGA CCTTCGCACC
ATCGACGCAA ATGGCCGCAC GACGCTGATC TGTGCCGGCG ATCAGATCGA AGAAGTGATG
GCACTCACCG GTATGCTCCG CACATGTGGG AGTGAAGTGA TTATCGGCTT TCGTTCGGAA
GCGGCACTCG CCCAATTCGA GCAGGCAATC GGTGAGAGTC GGCGCCTGGC CGGCGAGTCG
TTTATACCGC CAATTGCCCT TCCAATCGAC CTCCGTAATC CGAGCACGAT CGATGCCCTC
TTCGACTGGG CCGGCGAGAA TACCGGAGGT ATCCACGCTG CGGTTATCCT TCCGGCGTCG
GGGCGCGAGC CGGCCACGCA GGTTATCGAT ATTGACGACG CCCATGTGCA AGCGTTTTTG
AACGACGAGA TCGTCGGTTC GATTATCATT GCAAGCCGAC TGGCACGGTA TTGGCAAGCC
CAGCGGATCG CACCGGGAGC GCGGGCACGC GAGCCGCGTG TAATCTTTCT CTCGAATGGC
GCCAGTACCG CTGGCAACCC TTACGGACGG ATTCAGAGTG CCGCTATCGA ACAGTTGATC
CGTGTCTGGC GCCATGAGGC TGCCCTCGAC TATGAGCGTG CAACAGCAGC CGGTGAACGG
GTGTTGCCTG CGGTATGGGC CAGCCAGATT GTGCGCTTTG CGAACCGTAG CCTCGAAGGG
TTGGAGTTTG CCTGTGCGTG GACAGCACAG CTCTTGCATA GCCAGCGTCG GATCAACGAG
ATTACCCTGA CCATACCGGC CGACATTAGC GCAACGACCG GTGCCCGCAG TGCCTCGGTC
GGTTGGGCCG AAAGCCTCAT CGGCTTGCAT TTAGGCAAAG TGGCGCTGAT CACCGGCGGT
AGTGCCGGCA TTGGCGGGCA AATCGGTCGC TTGCTCGCCC TTAGCGGGGC GCGTGTGATG
CTCGCTGCCC GCGACCCACA CAAGCTCGAG CAGATACAAG CGACGATTCG GGCCGAACTG
GCCGAGGTCG GCTACACCGA CGTGGAGGAG CGGGTGCAAA TTGCACCGGG CTGTGATGTG
AGCAGTGAAG AACAGCTCGT CGATCTGGTA GAACGAACAC TCGCTGCGTT CGGCACGGTC
GATTATCTGA TCAACAACGC CGGTATCGCC GGAGTCGAAG AGATGGTGAT CGACATGCCG
GTTGAGGGCT GGCGGAATAC CCTCTACGCC AATCTGATCA GCAACTACTC GCTGATGCGT
AAACTGGCGC CACTCATGAA GAAGCAGGGG AGTGGCTATG TTCTCAACGT CTCGTCGTAT
TTTGGCGGCG AGAAAGATGC GGCAATTCCC TACCCGAACC GCGCCGACTA CGCTGTCTCC
AAGGCCGGTC AGCGAGCGAT GGCCGAGGTA TTTGCCCGCT TCCTTGGCCC CGAGATTCAG
ATCAACGCTA TTGCGCCGGG GCCGGTTGAG GGTGACCGGT TACGCGGTAC CGGCGAGCGA
CCTGGCCTAT TCGCGCGACG GGCACGGCTG ATCTTGGAGA ACAAGCGACT CAATGAACTA
CACGCTGCCC TGATTACGGC GGCCCGCACC GATAACCGCC CAATGCGTGA ACTGGTCGAA
TTGCTCTTAC CCAACGATGT TGCCGCGCTT GCCCAACATC CGGCAGCCCC TGACGTATTG
CGCACATTGG CAAAGCGATT CCAAAGTGAG GGAGACCCGG CAGCTTCTTC GAGCAGCTTC
TTGCTCAACC GCTCAATTGC GGCTAAGCTA CTGGCTCGGC TGATCAACGG TGGGTACGAT
CTACCGGCTG ACATCTTTGC TAACCTGGCA GTACCACCCG ATCCCTTCTT CACCCGTGCG
CAAATCGACC GTGAGGCGCG GAAGGTCCGC GACGGCATTA TGGGGATGCT GTACCTACAG
CGTATGCCGA CCGAGTTTGA CGTGGCGATG GCGACCGTCT ACTACCTCGC CGACCGCAAC
GTCAGCGGTG AAACCTTCCA TCCATCGGGC GGCCTGCGCT ACGAACGCAC TCCTACCGGT
GGCGAACTGT TCGGATTACC GGCGCCAGAA CGGCTGGCCG AACTCGTTGG GAGCACCGTC
TATCTGATCG GTGAACATCT CACCGAGCAT CTCAACTTAC TGGCGCGTGC CTATCTGGAG
CGATACGGTG CGCGACAGGT TGTGATGATC GTCGAAACGG AAGCCGGCGC CGAGAAGATG
CGTCATCTCT TACACGATCA CGTTGAGGCC GGTCGTTTAC CGATCATCGT TGCCGGTGAC
CAGATCGAAG CAGCCATTGA CCAGGCCATT GCCAACTATG GCCGACCAGG CCCGGTGGTT
TGCACTCCCT TCCGGCCACT ACCAAGCGCA CCGTTGGTTG GACGTAAGGA CAGCGACTGG
AGTACGGTGC TTAGTGAAGC AGAGTTTGCC GAATTGTGCG AACATCAACT AACGCACCAT
TTCCGTGTCG CCCGCAAGAT TGCACTGAGC GATGGAGCGA GTTTGGCGTT GGTCACACCC
GAAACGACGG CGACATCGAG CACCGAACAA TTTGCCCTGG CCAATTTCGT GAAGACAACG
CTCCATGCAT TTACAGCTAC GATTGGAGTG GAAAGTGAAC GTACCGCGCA GCGGATTCTG
ATCAATCAGG TTGATTTGAC CCGGCGTGCC CGTGCCGAAG AACCACGTGA TCCACGTGAG
CGCCAGCAAG AGTTGGAACG CTTTATCGAG GCTGTCTTGT TGGTCACTGC ACCGTTGCCG
CCAGAAGCTG ATACGCGCTA CGCCGGACGG ATCCATCGTG GGCGGGCAAT TACGGTCTAG
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| Protein sequence | MSVTGRLAGK IALITGGAGN IGSEMTRRFL AEGATVIISG RNSAKLAALA ERLRSEAGVP
AKRIDLEVMD GSDPAAVRAG VAAIIGRHGH IDILVNNAGS TGAQRRLAEI PLNETDRDLD
DEEALSTSVA NLLGMAWHLM RILSPHMPPG SAIINISTIF SRAEYYGRIP YVVPKAALNT
LTQIAARELG IRGIRVNTIF PGPIESERIQ TVFQRMDQLK GRPEGDTASQ FLATMRLYRA
NDQGQLERRF PTICDVADAA VFLASDEAAA LTGETIEVTH GMELPTSSET SLLARTDLRT
IDANGRTTLI CAGDQIEEVM ALTGMLRTCG SEVIIGFRSE AALAQFEQAI GESRRLAGES
FIPPIALPID LRNPSTIDAL FDWAGENTGG IHAAVILPAS GREPATQVID IDDAHVQAFL
NDEIVGSIII ASRLARYWQA QRIAPGARAR EPRVIFLSNG ASTAGNPYGR IQSAAIEQLI
RVWRHEAALD YERATAAGER VLPAVWASQI VRFANRSLEG LEFACAWTAQ LLHSQRRINE
ITLTIPADIS ATTGARSASV GWAESLIGLH LGKVALITGG SAGIGGQIGR LLALSGARVM
LAARDPHKLE QIQATIRAEL AEVGYTDVEE RVQIAPGCDV SSEEQLVDLV ERTLAAFGTV
DYLINNAGIA GVEEMVIDMP VEGWRNTLYA NLISNYSLMR KLAPLMKKQG SGYVLNVSSY
FGGEKDAAIP YPNRADYAVS KAGQRAMAEV FARFLGPEIQ INAIAPGPVE GDRLRGTGER
PGLFARRARL ILENKRLNEL HAALITAART DNRPMRELVE LLLPNDVAAL AQHPAAPDVL
RTLAKRFQSE GDPAASSSSF LLNRSIAAKL LARLINGGYD LPADIFANLA VPPDPFFTRA
QIDREARKVR DGIMGMLYLQ RMPTEFDVAM ATVYYLADRN VSGETFHPSG GLRYERTPTG
GELFGLPAPE RLAELVGSTV YLIGEHLTEH LNLLARAYLE RYGARQVVMI VETEAGAEKM
RHLLHDHVEA GRLPIIVAGD QIEAAIDQAI ANYGRPGPVV CTPFRPLPSA PLVGRKDSDW
STVLSEAEFA ELCEHQLTHH FRVARKIALS DGASLALVTP ETTATSSTEQ FALANFVKTT
LHAFTATIGV ESERTAQRIL INQVDLTRRA RAEEPRDPRE RQQELERFIE AVLLVTAPLP
PEADTRYAGR IHRGRAITV
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