Gene Cagg_1250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1250 
Symbol 
ID7266236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1530487 
End bp1532001 
Gene Length1515 bp 
Protein Length504 aa 
Translation table11 
GC content56% 
IMG OID643566092 
Producthypothetical protein 
Protein accessionYP_002462594 
Protein GI219848161 
COG category[V] Defense mechanisms 
COG ID[COG2367] Beta-lactamase class A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTTCC GGCCACGTTT GTTTGCCACT GCCCTGCTTT GCGTGGCTCT TCTTGCCGGG 
TGTACCACGT CACCGCGTTC GTCTGTGGTT ACCGATTCCG CGGAGGCCAC GGCAGCAGTA
CAACCTCCAT CGACACCGAT CCCTCTTCCA CCGTTGGTCC CCGTCTATGC TGATGGTACC
GAAATTGCCG GTGTGCCTGT AGGTGGTTTG AGCATGGCAG AAGCGCAGGC CTTATTGACC
ACTGCGTTGC CTGCGCCAAC GACACCGATC CTACTGGTCG CCGGAGATGT TCGCCAACCC
ATTGATCCGG CGGCTATTCG TTTGCGTCCC GATCTGAATC GGTTGCTGGC AGCGGCTGCT
CCGGCACTCG GTAGTGGTAC ACCGCTGAAG GTGCCGGTGC AATACTCGTT TGATGCAACT
GCTCTTCACG CCAAGCTTAC CGAGTTCGCC GTTGCATCGG CCCTTGCTCC AACGTTTACC
GTTATCACCT CGACCGATGT GCTTTCACGC AGTTTTGCCT ATCTGCCCGG GCGGGCTATT
GATCTCGATC GCTCGCTGGA AATTGTCAGC AGCTTACTCC GCCGTGGTCA GCTTACCCAT
CCGATCTACC TGACGCGCTG GCCAACGTCT GAAGTCCCAC GAGTCCCTCC CGAACAACTG
ACCGAACAAC TCGAAGCGCT GGTGGCTGAA TGGGATGGGG TCATCGGAGT CTATCTGTAC
GATCTACAAA CCGGTATTGA AACGGCAATC AATGCCCGTA CCGTCTTCGC CGGGACAAGT
ACCATCAAGA CGGCAATTAT GCTGTATGGC TATACCAAAT TGGCGTCGTT CACCGAAGAT
CAGTGGCAAC AGATGCGGGC AATGATTATC GAAAGCGATA ATCTGGCCGC CAACGATATT
TTGGCCGCCG GCGTCGGTGG TACAAGTACC GAGAGTGCGT TTCGCGGCGC CGAAGAGATG
AGTGATATGC TGGCCGATTT GGGGCTAGAG TATCTTTATC TGTACATCCC CTTCGAGTCA
CTTGATTACA TTCGGCTGTA CAACGTGAAG TTTCGTTGTG GCCCGAAGGA CCCGGTCGGC
GAACCGCCCT ACGCCGAGAC CGGTTGTGCC CTCCGTGCGA CACCGTATGC CATCAGCCAG
CTCTATCGCA TGATCGATGA GTGTGCCCGC GGTGAGGGGG TTTTGCTCGA GAAATTTGAT
CTGCTTAGTC CCGAACGTTG TCAAGAGATG CTCGATCTGT TAGCCGAAAA TGCAGATACG
ACCCGTATGG TCGCCGGGTT GCCGCCCGAT ATTCGGGTTG AACACAAGTC GGGCTGGATC
GAACATACGC AAGCCGATGC CGGTATTGTC CGTTCGCCCG GTGGTGATTA TGTACTGGCA
GTCTATGTAT ATAAACCGCT CGGTGATCGG TGGGCTTGGC CCGACGAACT ACTCGGCGGT
GTAATTGCCG ATGTTAGTCG CCTCGTGTAC ACTGCTTACA ACCCGATCCG ACTCGATCGC
TTACTGCAGG AGTGA
 
Protein sequence
MNFRPRLFAT ALLCVALLAG CTTSPRSSVV TDSAEATAAV QPPSTPIPLP PLVPVYADGT 
EIAGVPVGGL SMAEAQALLT TALPAPTTPI LLVAGDVRQP IDPAAIRLRP DLNRLLAAAA
PALGSGTPLK VPVQYSFDAT ALHAKLTEFA VASALAPTFT VITSTDVLSR SFAYLPGRAI
DLDRSLEIVS SLLRRGQLTH PIYLTRWPTS EVPRVPPEQL TEQLEALVAE WDGVIGVYLY
DLQTGIETAI NARTVFAGTS TIKTAIMLYG YTKLASFTED QWQQMRAMII ESDNLAANDI
LAAGVGGTST ESAFRGAEEM SDMLADLGLE YLYLYIPFES LDYIRLYNVK FRCGPKDPVG
EPPYAETGCA LRATPYAISQ LYRMIDECAR GEGVLLEKFD LLSPERCQEM LDLLAENADT
TRMVAGLPPD IRVEHKSGWI EHTQADAGIV RSPGGDYVLA VYVYKPLGDR WAWPDELLGG
VIADVSRLVY TAYNPIRLDR LLQE