Gene Cagg_1249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1249 
Symbol 
ID7266235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1528594 
End bp1530483 
Gene Length1890 bp 
Protein Length629 aa 
Translation table11 
GC content52% 
IMG OID643566091 
Producthypothetical protein 
Protein accessionYP_002462593 
Protein GI219848160 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.905075 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATGC CACCGATTAA GCGTATGGTG CTCTATAAAC ACGGTGTCGG TTATTTTGAA 
CGTCGTGGTC AATTCCATGG CGAGACGTTG ACGTTGAGCT TTCCCCGCAC CGCGATGGAC
GATGTGTTGA AGAGCCTGAT CGTGATCGAC CGCAGTGGAC AGGTGCGCAA TATCGATTTT
ACGACTCCCG AAGATCGTGC CGACCGGTTA GCACGGTCCG GTTTTCATCT TTCTCAAGAG
CAGAGTTTGC TCGATTTATT GCGCGATCTG CGTGGCCGAT CTGTGCGGCT CACCCTTGCC
GGTAAGCAAG CTGAACAAGT CAAAGGTTTA GTCATTGGGG TTGATGTTGA ACATGAGCAA
CCGTTGCGTC GGGCATTGGT CAGCCTGTAC CTGAGCGATC AACGGGTGGT ACGACCGTTT
ACTCTTGACG ACATCGTTCA AGTCGAATTG CTTGAGGAAG TCGTCCACAA TGATCTCATC
TTTTTCTTAC ACGCCGACCA CGGCGATCGG AGCGACCGCT CGGTCACCGT TCACCTTACA
CCCGGCGACC ACGATTTGCT GATCGGTTAT GTGGCTCCGG CGCCGGCCTG GCGGGTGAGC
TATCGCTTGC TGTTCGAGGA GGACGGTAAC GAGGCTCGTT GTTGGTTACA GGGGTGGGGT
CTGTTCGATA ACCTTTTAGA CGAGGATCTG CGTGATGTAG AGGTGACATT AGTCGCCGGT
CAGCCGATCT CGTTTCATTA CCAGTTGTAT CAACCACAGA CGCCTGATCG ACCCGTCGTC
ACCAATCGAC CGCCTCCATC ACCGAAGCCG AAAAGAAGAG CGTCGTTTTT GGAAGAAAGT
GTTAGTGAGG ATGAGATACA AATACACGCT CTTGCAGTGT CTGATTCAAC GGAAGCGGCT
GAAAGTACAC CAACGGCAGC TTCCGGTGAG GATCGTGATG TGCTCTTTGC CTATCGTGTT
CACCAGCCGG TGAGTGTCGG ACGCGGTCAG TCGGCGATGG CACCGATTGT CGGTTCCTAC
CTGCCGGCGC GGCGTGTCCT TGTCTACAAC TCAAAACAGA TGAATCGCCA TCCCTTTGCT
GCCTTGTTTC TCACCAATAC TACCGACTTG ACCCTCGAGC AAGGTCCGGT AACGGTCTTG
ATCGGCGGTG AGTATGCCGG TGAAGCGGTC GTACCGTTTA CCCGTGCCGG CGCCGAGATC
AAAGTGCTCT ACGCTGCTGA GTTAGGCGTG ACGGTGAGTG AATCTTTTGA TATTCAAAAT
ATATTACGGA GTATTCGTTT GGGGCAAGGC GATTTGATTG CCGATTCGTA CCTTCTGACG
TTTTCCCGGT ACAAGATTAC CAGTACATTG GCCAAATCGT GTACGGTTAC CATTGAACAT
ACGCTCTCGG ATAATGCCGA ACTCGTTGAT ACACCACCGC CACAGAGCCA AACCAACGAA
TTGGCAAGCT GGAATGTTGA AGTGCCGGCC TTCGGTAGTG TCGAGTTTAC GGTTTGCGAA
CGCTCCCCTA GCTCACGTTA CGAAACAATT TCGAGCCTGA CCGGTGAAAA GTTGCAAGCG
TGGTTACACG ATAAAGTTAT CGACGACACA ACCTTTCAGC ACTTGTCACG TGTTTTGAAT
CTGTTGCGCC AAATTGATGC TGCCAAACAG CAGATTGCCG AGTACGAGCG CGAGCAGCAG
CGCATCTTCG AGCGTCAAAA GCGTTTACAG CAACAGCTTA CACCTTTGCA TAGCGATGGT
GAGGAAGGGG CGTTGCGGCA GCGGTATGTC GCGACGTTAG ATCAGCTTGA AAATCAGCTC
GAACAGATAG AGGCAGCTAT CACCGATCAA CAGAATCTGA TCAAAAAGCA CAAAGATCGG
CTTGATCGCA TGCTGCGCCA ATTACAATAA
 
Protein sequence
MTMPPIKRMV LYKHGVGYFE RRGQFHGETL TLSFPRTAMD DVLKSLIVID RSGQVRNIDF 
TTPEDRADRL ARSGFHLSQE QSLLDLLRDL RGRSVRLTLA GKQAEQVKGL VIGVDVEHEQ
PLRRALVSLY LSDQRVVRPF TLDDIVQVEL LEEVVHNDLI FFLHADHGDR SDRSVTVHLT
PGDHDLLIGY VAPAPAWRVS YRLLFEEDGN EARCWLQGWG LFDNLLDEDL RDVEVTLVAG
QPISFHYQLY QPQTPDRPVV TNRPPPSPKP KRRASFLEES VSEDEIQIHA LAVSDSTEAA
ESTPTAASGE DRDVLFAYRV HQPVSVGRGQ SAMAPIVGSY LPARRVLVYN SKQMNRHPFA
ALFLTNTTDL TLEQGPVTVL IGGEYAGEAV VPFTRAGAEI KVLYAAELGV TVSESFDIQN
ILRSIRLGQG DLIADSYLLT FSRYKITSTL AKSCTVTIEH TLSDNAELVD TPPPQSQTNE
LASWNVEVPA FGSVEFTVCE RSPSSRYETI SSLTGEKLQA WLHDKVIDDT TFQHLSRVLN
LLRQIDAAKQ QIAEYEREQQ RIFERQKRLQ QQLTPLHSDG EEGALRQRYV ATLDQLENQL
EQIEAAITDQ QNLIKKHKDR LDRMLRQLQ