Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_1249 |
Symbol | |
ID | 7266235 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 1528594 |
End bp | 1530483 |
Gene Length | 1890 bp |
Protein Length | 629 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 643566091 |
Product | hypothetical protein |
Protein accession | YP_002462593 |
Protein GI | 219848160 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.905075 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGATGC CACCGATTAA GCGTATGGTG CTCTATAAAC ACGGTGTCGG TTATTTTGAA CGTCGTGGTC AATTCCATGG CGAGACGTTG ACGTTGAGCT TTCCCCGCAC CGCGATGGAC GATGTGTTGA AGAGCCTGAT CGTGATCGAC CGCAGTGGAC AGGTGCGCAA TATCGATTTT ACGACTCCCG AAGATCGTGC CGACCGGTTA GCACGGTCCG GTTTTCATCT TTCTCAAGAG CAGAGTTTGC TCGATTTATT GCGCGATCTG CGTGGCCGAT CTGTGCGGCT CACCCTTGCC GGTAAGCAAG CTGAACAAGT CAAAGGTTTA GTCATTGGGG TTGATGTTGA ACATGAGCAA CCGTTGCGTC GGGCATTGGT CAGCCTGTAC CTGAGCGATC AACGGGTGGT ACGACCGTTT ACTCTTGACG ACATCGTTCA AGTCGAATTG CTTGAGGAAG TCGTCCACAA TGATCTCATC TTTTTCTTAC ACGCCGACCA CGGCGATCGG AGCGACCGCT CGGTCACCGT TCACCTTACA CCCGGCGACC ACGATTTGCT GATCGGTTAT GTGGCTCCGG CGCCGGCCTG GCGGGTGAGC TATCGCTTGC TGTTCGAGGA GGACGGTAAC GAGGCTCGTT GTTGGTTACA GGGGTGGGGT CTGTTCGATA ACCTTTTAGA CGAGGATCTG CGTGATGTAG AGGTGACATT AGTCGCCGGT CAGCCGATCT CGTTTCATTA CCAGTTGTAT CAACCACAGA CGCCTGATCG ACCCGTCGTC ACCAATCGAC CGCCTCCATC ACCGAAGCCG AAAAGAAGAG CGTCGTTTTT GGAAGAAAGT GTTAGTGAGG ATGAGATACA AATACACGCT CTTGCAGTGT CTGATTCAAC GGAAGCGGCT GAAAGTACAC CAACGGCAGC TTCCGGTGAG GATCGTGATG TGCTCTTTGC CTATCGTGTT CACCAGCCGG TGAGTGTCGG ACGCGGTCAG TCGGCGATGG CACCGATTGT CGGTTCCTAC CTGCCGGCGC GGCGTGTCCT TGTCTACAAC TCAAAACAGA TGAATCGCCA TCCCTTTGCT GCCTTGTTTC TCACCAATAC TACCGACTTG ACCCTCGAGC AAGGTCCGGT AACGGTCTTG ATCGGCGGTG AGTATGCCGG TGAAGCGGTC GTACCGTTTA CCCGTGCCGG CGCCGAGATC AAAGTGCTCT ACGCTGCTGA GTTAGGCGTG ACGGTGAGTG AATCTTTTGA TATTCAAAAT ATATTACGGA GTATTCGTTT GGGGCAAGGC GATTTGATTG CCGATTCGTA CCTTCTGACG TTTTCCCGGT ACAAGATTAC CAGTACATTG GCCAAATCGT GTACGGTTAC CATTGAACAT ACGCTCTCGG ATAATGCCGA ACTCGTTGAT ACACCACCGC CACAGAGCCA AACCAACGAA TTGGCAAGCT GGAATGTTGA AGTGCCGGCC TTCGGTAGTG TCGAGTTTAC GGTTTGCGAA CGCTCCCCTA GCTCACGTTA CGAAACAATT TCGAGCCTGA CCGGTGAAAA GTTGCAAGCG TGGTTACACG ATAAAGTTAT CGACGACACA ACCTTTCAGC ACTTGTCACG TGTTTTGAAT CTGTTGCGCC AAATTGATGC TGCCAAACAG CAGATTGCCG AGTACGAGCG CGAGCAGCAG CGCATCTTCG AGCGTCAAAA GCGTTTACAG CAACAGCTTA CACCTTTGCA TAGCGATGGT GAGGAAGGGG CGTTGCGGCA GCGGTATGTC GCGACGTTAG ATCAGCTTGA AAATCAGCTC GAACAGATAG AGGCAGCTAT CACCGATCAA CAGAATCTGA TCAAAAAGCA CAAAGATCGG CTTGATCGCA TGCTGCGCCA ATTACAATAA
|
Protein sequence | MTMPPIKRMV LYKHGVGYFE RRGQFHGETL TLSFPRTAMD DVLKSLIVID RSGQVRNIDF TTPEDRADRL ARSGFHLSQE QSLLDLLRDL RGRSVRLTLA GKQAEQVKGL VIGVDVEHEQ PLRRALVSLY LSDQRVVRPF TLDDIVQVEL LEEVVHNDLI FFLHADHGDR SDRSVTVHLT PGDHDLLIGY VAPAPAWRVS YRLLFEEDGN EARCWLQGWG LFDNLLDEDL RDVEVTLVAG QPISFHYQLY QPQTPDRPVV TNRPPPSPKP KRRASFLEES VSEDEIQIHA LAVSDSTEAA ESTPTAASGE DRDVLFAYRV HQPVSVGRGQ SAMAPIVGSY LPARRVLVYN SKQMNRHPFA ALFLTNTTDL TLEQGPVTVL IGGEYAGEAV VPFTRAGAEI KVLYAAELGV TVSESFDIQN ILRSIRLGQG DLIADSYLLT FSRYKITSTL AKSCTVTIEH TLSDNAELVD TPPPQSQTNE LASWNVEVPA FGSVEFTVCE RSPSSRYETI SSLTGEKLQA WLHDKVIDDT TFQHLSRVLN LLRQIDAAKQ QIAEYEREQQ RIFERQKRLQ QQLTPLHSDG EEGALRQRYV ATLDQLENQL EQIEAAITDQ QNLIKKHKDR LDRMLRQLQ
|
| |