Gene Cagg_1231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1231 
Symbol 
ID7266217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1507909 
End bp1508577 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content59% 
IMG OID643566074 
Product5-amino-6-(5-phosphoribosylamino)uracil reductase 
Protein accessionYP_002462576 
Protein GI219848143 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1985] Pyrimidine reductase, riboflavin biosynthesis 
TIGRFAM ID[TIGR00227] riboflavin-specific deaminase C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGAC CAAGAGTAAC CCTTAGTTTT GCGCAGACGC TTGACGGACG GGTAGCCGCC 
GTTGATGGCA GTTCACAGTG GATCAGTAGC GCGGACTCGC TGCATTTTTG TCATTCCTTG
CGTGCCGCTA GTGATGCAAT TATGGTCGGC GTCGGTACCG TGCTGCGCGA CGATCCGCGG
TTAACGGTGC GGCTCGTGGA AGGATGCGAT CCGGTGCGGG TTATCGTTGA TAGCACGCTG
CGCACACCAC CCACTGCGGC AGTGATTCGT GATGGTGCAG CGCGTGGTAC CGTGCTGGCC
TGCACCGCAG CCGCACCATC AGAGCGCCGC ACGGTCTTAC GGGAGCTTGG AGCAACTATC
CTTACGCTAC CGGCTACTCC AGATGGTAAA GTTGATCTGG TGGCGCTCCT CGCGAGCCTA
GCAGAACGAG GTATCGCCAG CATCATGGTC GAAGGTGGTG CGTGTCTCAT AACCGGTCTG
CTCCGCGCGC ACCTGGTTGA TGCAGTCGCC ATTACCATTG CCCCTTTGAT CCTCGGCGCG
GGGCCGGCAG CCGTTGGTGA CTTGGGGATC ACGACGTTAG CGCAGGCTAT CAAACTCGGT
GATGTACGCT GGACGACCTA CGGCGTTGAT GTGGTTCTAG AGGGTGAGGT GTTGTGGTCA
GCAACATAA
 
Protein sequence
MIRPRVTLSF AQTLDGRVAA VDGSSQWISS ADSLHFCHSL RAASDAIMVG VGTVLRDDPR 
LTVRLVEGCD PVRVIVDSTL RTPPTAAVIR DGAARGTVLA CTAAAPSERR TVLRELGATI
LTLPATPDGK VDLVALLASL AERGIASIMV EGGACLITGL LRAHLVDAVA ITIAPLILGA
GPAAVGDLGI TTLAQAIKLG DVRWTTYGVD VVLEGEVLWS AT