Gene Cagg_1228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1228 
Symbol 
ID7266214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1506112 
End bp1506606 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content55% 
IMG OID643566071 
Productprotein of unknown function DUF901 
Protein accessionYP_002462573 
Protein GI219848140 
COG category[R] General function prediction only 
COG ID[COG3688] Predicted RNA-binding protein containing a PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTATTC TCATTGACGG CCACAACCTG ATTGGGCAAA TGCCTGACAT TGACCTTAGC 
GACCCCGACG ACGAAGAAAA GTTGGTCGCG AAACTCCGCC GCTACGCTGC ACGTAAGCGT
GGCCGGAAGA TTGTGGTCGT CTTTGATGGT GGCGTATACG GCCACCCGCA AAACTTGAAC
GGTTACGGCG TGGAAACACG CTTCATCAAA CCACCACACA ACGCCGATCA AGAGCTGATC
CGGCAAATTC GAGCGATTCG TCGCCGTGAC GAGTGGCTGG TCGTTTCATC AGACCGAGCA
GTCGTCAGAG AAGCGCAGGC ACGTGGCATT CCGGTCATCT CGGCCCAAGA GTTTGCCCGT
CGTTTGCAAC AGCTCGACCA ACCACGGATC AATGCGCGTG ACAAACGTGG CGACCGCCCG
TTGAGTAAAG CCGAAATTGA GGATTGGCTA CGTTTTTTTG GCGTCGATGA AGACGAAGAC
ACGCTCTATT ATTGA
 
Protein sequence
MPILIDGHNL IGQMPDIDLS DPDDEEKLVA KLRRYAARKR GRKIVVVFDG GVYGHPQNLN 
GYGVETRFIK PPHNADQELI RQIRAIRRRD EWLVVSSDRA VVREAQARGI PVISAQEFAR
RLQQLDQPRI NARDKRGDRP LSKAEIEDWL RFFGVDEDED TLYY