Gene Cagg_1227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1227 
Symbol 
ID7266213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1504453 
End bp1505529 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content55% 
IMG OID643566070 
Producthypothetical protein 
Protein accessionYP_002462572 
Protein GI219848139 
COG category[S] Function unknown 
COG ID[COG3595] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.27751 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCG ATGTACCAAG AGATTCCGAA CGCCCGGTCG AGCGACAGCT CAGCCGACGA 
TGGCTGGGGA TGGTGTTGAT CCTCGGTGGA CTGGGATGGT TGTTGTTTGA ACTGTTGATT
CGCGGTACGA TTGCCGGTAT TGACCTCAAT CTTGCTCGCT CTGATAGTGT GCAGCGTATT
GCAGAGCAAC GATTTATCGT GAAGCGAGTA GAAGTCGTCG GGGTAAACGA TCAGGTCGTT
CTGACCGGCA CCACCGGTGA GGAAGTCGTC CTCCGCGGTG AACGGCGCGG GTTTGGTTGG
GCGGCCAATG CTGCTGCCGA TGCGGCGACC AAGATCGAGC TACAGATCGA ACAACGTGGT
GATACACTCC ATATCAATGT GAAACACCCA CAATGGGCGC CGTGGAGTTT CGGTCGTAAT
CCGTATGCCT ACCTTGAATT AGCGCTCCCA TCGGATGCTA CGTTTGAGCT TTCCCTTGTC
TCCGGCGATG CTACATTACG TCAGGTAGCC GCTCATGGCA CCATTACGAC GATCAGTGGT
GAGGTGCGCG CCGAAGGCAC TACCGGTCAG CTTACCCTTA ACACAACGAG CGGTGATGTC
ACGCTGAGCG ATCATCACAG TGAGCTTACC TTCTTGACGG TGAGCGGTGA TCTGTCGGCA
AGTGGCCTCC TTGGCGAGGT CATCGCTCAG ACAACGAGCG GTGATGTCAG GCTCATCGGT
GTGCGTGGGC CGGTGCAAGT AACGACCGTT TCCGGCGATG TCGATATTAA GGCAAGTGAC
GAGGCGGTTC GGCTTGCGAT CGACACCACC AGCGGTGACA TTTCCTTTTC TGGTCGTCTA
GCGGACGGTG AACAGCACGT GAGCACCATT TCCGGTAATG TGCAATTAAC GCTCTCGCCG
CCGTTCGATG TTCAGCTCAA CTTCCGTACC ATCGGTGGCA AGATCGATGT GCCTGCCCGT
TTGGCTACGC AAGTGAGTAA TGCTCGTTCG CTGCAAACAA CGCTTGGTGA AGGTCGGTCA
CTCTTGAACG TTGAGGCAAC GTCGGGCAAT ATTACGTTGC GCTTAGCAGA GCAGTGA
 
Protein sequence
MKTDVPRDSE RPVERQLSRR WLGMVLILGG LGWLLFELLI RGTIAGIDLN LARSDSVQRI 
AEQRFIVKRV EVVGVNDQVV LTGTTGEEVV LRGERRGFGW AANAAADAAT KIELQIEQRG
DTLHINVKHP QWAPWSFGRN PYAYLELALP SDATFELSLV SGDATLRQVA AHGTITTISG
EVRAEGTTGQ LTLNTTSGDV TLSDHHSELT FLTVSGDLSA SGLLGEVIAQ TTSGDVRLIG
VRGPVQVTTV SGDVDIKASD EAVRLAIDTT SGDISFSGRL ADGEQHVSTI SGNVQLTLSP
PFDVQLNFRT IGGKIDVPAR LATQVSNARS LQTTLGEGRS LLNVEATSGN ITLRLAEQ