Gene Cagg_1214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1214 
Symbol 
ID7266733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1491499 
End bp1492182 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content58% 
IMG OID643566057 
Productputative lipase 
Protein accessionYP_002462559 
Protein GI219848126 
COG category[R] General function prediction only 
COG ID[COG1075] Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.132802 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGTC CGGTGGTTAT TATGGGTGGG TGGCTGTCGT CACCCGCCGA TTATTTCGGT 
ATGGCGCGTG TTTTAGCGTC GCCGCCGTAC AATCGTATTG TGTACGTGGT CGATTTCGGT
CGCCTGGACT GGGCACGGTT GCGCGATCCT GATTTCGGTC CGGCACTCGA TGCCTTGGCC
GCTACAGTGC GGATTGCGCT GGCAGAAACC GGTGCCGATA AAGTCGATCT GATCGGCCAT
AGTGCGGGTG GCCGGATCGC GCGGGCCTAC CTTGCCGATG AACCGTATCA GGGAGTGCGT
TACGCCGGTC ATGAAGTTGT GGCGAGCCTG ACAACGTTAG GGACAGCCCA TGCCACGTCT
GAAATTTGGG TGAAGCAATT CGCCGATTGG CTTGAGGCAC GCTATCCTGG CGCCGCCTTC
CCCCATATCA AATACCGTAC CGTTGCCGGG CGTAGTGTGC GTGGTCGCCG CTTTGGTACG
CCGGAAGAGA TGATTGCCTA TCGCTCGTAT GAAGTCTCTT TCGGTAATGG CAATCTGATC
GGTGATGGTA TTGTGCCGAC AGACGCATGT TATCTACCCG GCGCGGATAA TCTGATCCTG
GAAGGGGCGC GGCATGCGCC GTACAACGCC CCGACCACGT GGTACGGCGC CCGTGAGGTA
GTACCACTTT GGTTTGATAC CTGA
 
Protein sequence
MSRPVVIMGG WLSSPADYFG MARVLASPPY NRIVYVVDFG RLDWARLRDP DFGPALDALA 
ATVRIALAET GADKVDLIGH SAGGRIARAY LADEPYQGVR YAGHEVVASL TTLGTAHATS
EIWVKQFADW LEARYPGAAF PHIKYRTVAG RSVRGRRFGT PEEMIAYRSY EVSFGNGNLI
GDGIVPTDAC YLPGADNLIL EGARHAPYNA PTTWYGAREV VPLWFDT