Gene Cagg_1213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1213 
Symbol 
ID7267962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1490777 
End bp1491490 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content57% 
IMG OID643566056 
Productputative lipase 
Protein accessionYP_002462558 
Protein GI219848125 
COG category[R] General function prediction only 
COG ID[COG1075] Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.137275 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGTC CGTTGGTCAT TATCGGTGGT TACCTGACAA GCCCGCACGA TTTTCGGGCG 
TTAGCCCAGG CGCTGACGCA GGCACCATTT CATTTTCAGG TGTTTGTAAC ACCGATTGGT
CGCTTACGCT GGGCTTTAAC CCGCGATTGG GATTTTCGAC CGGTGTTGCG GATTGTCCGT
GAGACGGTTG CTCAAGCGTT ACGTGAGACC GGTGCGCAGA CGGTAACTAT TCTTGCCCAT
AGCGTCGGTG GGACGGTCGC GCGGATGTAT CTTGGCGATC AGCCGTACAA GGGTGAAATC
TACGGCGGTC ATCGCTTCGT TCACCACTTG ATCATGCTGG GCACACCACA TCATAGCCAA
GAGTTCTGGA CGCGCCGAAC CGTCGGCTTT ACCAACCGTT GTTATCCGGG TGCGTATTAT
AACCATGTAC GCTACACTTC GATCATTGGG CGTAGTATTC GCGCCAATCG GCGCGGACGC
TGGATTGAAC GGATGGCGTA CAACAGCTAT GTCATGATCG ACGGGCCTAC CGGCGCCGAA
GCGTGGGGCG ATGGGATCAC GACCCTGACG TGTGCCGCAC TACCCGGTGC AGAGTATTTC
GTGGTTCCCG GCTTGCATCA TTCGCCGATC CACGGGCGGC CGTGGTATGG CGATCCGGAA
GGGTTAAGAT ACTGGCAACG TGTGTTGTTG AGTTCCGCTC CGGTTGTTGT TTGA
 
Protein sequence
MARPLVIIGG YLTSPHDFRA LAQALTQAPF HFQVFVTPIG RLRWALTRDW DFRPVLRIVR 
ETVAQALRET GAQTVTILAH SVGGTVARMY LGDQPYKGEI YGGHRFVHHL IMLGTPHHSQ
EFWTRRTVGF TNRCYPGAYY NHVRYTSIIG RSIRANRRGR WIERMAYNSY VMIDGPTGAE
AWGDGITTLT CAALPGAEYF VVPGLHHSPI HGRPWYGDPE GLRYWQRVLL SSAPVVV