Gene Cagg_1210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1210 
Symbol 
ID7267959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1488166 
End bp1489083 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content53% 
IMG OID643566053 
Productbacteriochlorophyll/chlorophyll synthetase 
Protein accessionYP_002462555 
Protein GI219848122 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases 
TIGRFAM ID[TIGR01476] bacteriochlorophyll/chlorophyll synthetase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.441233 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.145879 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTCAA CGGAACAGCG CGTCTCGCTC AGCCGAAAGA TCCGTGCCCA TATCGAATTG 
GCCGATCCGG TGACATGGAT CTCACCGGTA CTCGTCTGTT TCTGTGGGGC ACTGGCTTCA
GGGTACGAGC GGGGTTTTGA TTGGACACGG CCCGATCACT GGTGGCTGAT GCTCTTGGGT
GCGCTGATGA CCGGTCCACT CGGTACCGGC TTTAGCCAGA GTATCAACGA CTATTTTGAT
CGCGAACTTG ATGCGATCAA CGATCCGCAA CGTCCGATTC CGGCAGGTAT TCTGACACTC
AACGAGGCGC GTTGGAATTG GATCGTACTC GGTACCGCGA CAATGCTGGT GTCGTTGGTG
TTTGGGCAAC CATTGATCGT GGTTCTCGCC TTCGTCGGTA TTGTGCTGTC GGTGATCTAC
AGCATGCCCC CGATTAAGCT CAAGAAGCAC TTTTGGCTGG GTCCACCGGC CGTCGGCTTG
GGCTATGTCA GTATGAGTTG GTTGGCCGGC CACCTGATCT TTGCTCCCCT CACATGGCAA
AGTGTCGTCG TGGCATTGAT CAACGGTGGT TTGGCAGCCG GTCTGCTCTT CCTCAACGAC
ATTAAAAGTG TGGAAGGTGA CCGTAAGTTG GGGTTGAAAT CGCTGACCGT AGCGATCGGT
GTTAAGCGCA CGCTGATCGT AGCGTATGTA ACGATTAATA CCTTCGAGAC ACTTCTGATG
ATCTTGGCGT TGGTATGGGG TCAGTATTGG GTGGCGTTGT TTATGCTGTT GGCGTTGGTA
GCGCCGATCT ACAACCAGAT CAAGCTCTAC CGTGAGCCGA CCCAGCAGAA TTATGTGCGC
TATCTACTGG CCTCTAATCC GTTCGTCGCT TTGATCCAGA TAATCTCGGG TTTTCTCGTA
GGCGGCTATT TTGGCTGA
 
Protein sequence
MISTEQRVSL SRKIRAHIEL ADPVTWISPV LVCFCGALAS GYERGFDWTR PDHWWLMLLG 
ALMTGPLGTG FSQSINDYFD RELDAINDPQ RPIPAGILTL NEARWNWIVL GTATMLVSLV
FGQPLIVVLA FVGIVLSVIY SMPPIKLKKH FWLGPPAVGL GYVSMSWLAG HLIFAPLTWQ
SVVVALINGG LAAGLLFLND IKSVEGDRKL GLKSLTVAIG VKRTLIVAYV TINTFETLLM
ILALVWGQYW VALFMLLALV APIYNQIKLY REPTQQNYVR YLLASNPFVA LIQIISGFLV
GGYFG