Gene Cagg_1202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1202 
Symbol 
ID7267951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1482124 
End bp1483071 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content55% 
IMG OID643566045 
Productdaunorubicin resistance ABC transporter ATPase subunit 
Protein accessionYP_002462547 
Protein GI219848114 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID[TIGR01188] daunorubicin resistance ABC transporter ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.798744 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0328977 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCAGT TAGCTGTCGA AACCATTGAC TTAGTTAAAC GGTACGGCTC ACTTACAGCC 
CTCGATCACG TCAACCTGCA AGCGCCGGCA GGGCAGATTT ATGCCCTCCT TGGCCCTAAC
GGTGCCGGTA AAACCACGCT GCTGAGTATC CTGACTACTC TCATCCCTCC GACTTCTGGG
ACGGCCCGCA TCCTCGGTTA TGACGTCAGT CGCGAGGCGG CAGAAGTCCG CCGCCGGCTC
GGAGTCACCT TTCAAGAGAT GGTTCTCGAT CCATTACTGA CCGGACGCGA GACGCTCGAT
TTTCACGGGC GGCTTTACCG TCTCCCGGCA GCGGTTCGTC GGCAACGGAT CGCCGAGTTG
GTCGAGTTGG TGCAGTTAAC CGAGGCGATA GATCGGCCCG TCAAGAGCTA TTCGGGTGGT
ATGAAACGAC GACTCGAATT AGCACGTGGG TTGATGACCG ATCCACAGGT GTTGGTGCTT
GACGAACCAA CACAGGGCCT CGATCCGCAA AATCGGGTGA ATATCTGGAG CTATATCCGC
GATTTAAACC GGCATCGCGG TATGACCATC TTACTCACCA CCCACGCGAT GGACGAAGCC
GAGGCATTGG CCGATTTGGT CGGTATTATC GATCATGGCC GATTGATCGT CGAAGGCAAA
CCCGGTGATC TGATCGCGGC GTTGGGGTCA GATGTGATTC GAGTACGCGG TCAGGGGAAC
TTCGATCATC TGGCAACGAC GGTCAGTACT ATTGAAGGGG TCAACCGTAC CGAGATCGAT
CCAGCCGATG GAATTGCGCT GATTTACGTC GATAATGGTA GTCGGCGATT GCCGGCAGTA
TTAGGGACGA TCAGTAGTAA TGGGTTTGTC GCGGAAGATG TGACATTAGC TCGACCATCG
CTCGGTGATG TCTTTTTGCA CTACACCGGT ACGGCACTGC GCGATTGA
 
Protein sequence
MNQLAVETID LVKRYGSLTA LDHVNLQAPA GQIYALLGPN GAGKTTLLSI LTTLIPPTSG 
TARILGYDVS REAAEVRRRL GVTFQEMVLD PLLTGRETLD FHGRLYRLPA AVRRQRIAEL
VELVQLTEAI DRPVKSYSGG MKRRLELARG LMTDPQVLVL DEPTQGLDPQ NRVNIWSYIR
DLNRHRGMTI LLTTHAMDEA EALADLVGII DHGRLIVEGK PGDLIAALGS DVIRVRGQGN
FDHLATTVST IEGVNRTEID PADGIALIYV DNGSRRLPAV LGTISSNGFV AEDVTLARPS
LGDVFLHYTG TALRD