| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_1196 |
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| Symbol | |
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| ID | 7267945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chloroflexus aggregans DSM 9485 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011831 |
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| Strand | + |
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| Start bp | 1475409 |
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| End bp | 1476350 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 643566039 |
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| Product | 60 kDa inner membrane insertion protein |
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| Protein accession | YP_002462541 |
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| Protein GI | 219848108 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000975332 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000283466 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAATATCT GGTCGGCATT CGTTGGGTTG CTCGAACAAT TACTCCTCTT CTTCTCATCA
CTGACCGGCA ATATGGCATT GGGCATCGTG CTCTTCACGA TCGCTGCCCG TCTCTTTATC
TTGCCACTTA CCCTCAGCTC GTTGCGTTCG AGTCGCCGAA TGCAAGAGGT ACAGCCAATC
CTGAAAGAGA TTCAGCGTAA GTACGGCAAA GACCCGCAAC GACTCCAAGA AGAAACCCTA
CGGGTTTACC GTGAATATAA GATTAATCCG GTAGGCGGCT GTCTGCCTCT TTTGCTGCAA
CTACCGATTT TCTTCGGCGT GTATCAAGCT GTCTATCACT TGATGGTACC TGAACAGCGC
GTGAATTTGA GCGCTGCTGC GGCCGAGATG TTGAAAGATG AACGCCTGGC ACAAATTCTC
AGTGCTCCGT TCTTCGGTAT GGACCTGGGG GTGCCGGCAT TTGGTCCAAA TGGGTTTGCC
GGTTTTGCTT ATCTTGTCTT ACCGGTACTA TCGATCGTTT TACAATTGGT ACAGCAGCTC
ATGGCAACAC CGCGGGTTCA AGATCCACAG CAGAAGGCAT TTACCCAAGC AATGTTGATC
ATGCCGTTTG TATTTGGATA CATTGCCTTC ACCTTCCCCA CCGGTGCTGT CCTGTACTGG
GTCGTGAGCA GTGTGATCGG CGTGATCCAG CAGTACTTTA CATCGGGTTG GGGTTCACTG
GCCAACTATT TGCGGTTCTT GCCACCCGAC AATCGTCCTA TACCGGCGAT GAGCCTCGCG
TCGGCCTCTG CCACTACAAC CGAAACCCAA ACCGAGACAC CAAAAGTCGA TTTTTGGTCG
GTCATGCGCC CATTGATCGA AGCGCCGGTT GAGCAGAGTG AAGTGGGTGG TGAGGAGCAG
CGTACATCAC GTCAACACCC CAATCCTCGT CGTCGCCGTT AA
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| Protein sequence | MNIWSAFVGL LEQLLLFFSS LTGNMALGIV LFTIAARLFI LPLTLSSLRS SRRMQEVQPI
LKEIQRKYGK DPQRLQEETL RVYREYKINP VGGCLPLLLQ LPIFFGVYQA VYHLMVPEQR
VNLSAAAAEM LKDERLAQIL SAPFFGMDLG VPAFGPNGFA GFAYLVLPVL SIVLQLVQQL
MATPRVQDPQ QKAFTQAMLI MPFVFGYIAF TFPTGAVLYW VVSSVIGVIQ QYFTSGWGSL
ANYLRFLPPD NRPIPAMSLA SASATTTETQ TETPKVDFWS VMRPLIEAPV EQSEVGGEEQ
RTSRQHPNPR RRR
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