Gene Cagg_1182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1182 
Symbol 
ID7267931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1456539 
End bp1457603 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content60% 
IMG OID643566025 
Producthistidine kinase 
Protein accessionYP_002462527 
Protein GI219848094 
COG category[T] Signal transduction mechanisms 
COG ID[COG5002] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00360625 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTTCAAT TTTGGCGACA ACTCCGCTGG CAAATCATCG GTGCCCAGAT GCTGGTCGTC 
ATCGTTGGTG TGGTAACCCT CAACCTCACC GCCAACGCCC TTCTCGAACA GACCGTCCCT
CCTGAGCAAT TCACGACCGT GCATACCGCC GTCATTCAAG CGCTCACCAT CGCCGCGATT
GCCGCGACCA TTGCCGGCCT CACCACCAGC ATCCTACTCG TGCAAGTCAT TTTACGTTCG
CTACGCAGCA TCGCCCATAG CTCACAACGC ATCGCAGCCG GACGCTACGA CGAGCGGGTG
AATGTACCGG CAAGCGACGA ACTGCGCGCC GTCGCCGAAA GCTTTAACCA GATGGCCGAA
GCGCTCGAAC AGATCGAACA GCGTCGCGTC ACGATGATTG GCAACGTTGC TCACGAACTG
CGCACACCGC TGGCCGGCAT CGAAGGCTAC CTGGAAGGCT TAATCGACGG TGTCCTTCCG
GCTGAAGCCG ACACCTTCCT CGAGATGAAA CACGAGGTTC GCCGCTTGCA CCGGCTCGTT
GACGACCTGC AAACCCTCTC GCGCGTCGAA GCCGGCCAAA TCTCGCTCCA CTTCACCACC
TTCGACATCA ACGAAGTCAT CCGGCACGTC GTTAGTCAAC TCCAACCACA GGTCCTCGAC
GGCTGCCTCA AAATTATCTG CGAACGCACC GATCAACCGA TACTAACCCG GGCCGATCCA
GATCGTGTCG CCCAAATCTT GCTCAACCTG CTCGGCAACG CGGTGCGCTA CACCCCAGAA
GGTGGCTGCA TTACAGTTCG CTCAGATCTC GTCAATGAGT GGGTGAAGGT CACGGTAGAA
GATACCGGCA TCGGCATCGC TCCTGAACAT CTACCCTACA TCTTCGAGCG CTTCTACCGC
GCCGACCCAT CGCGTTCACG CGCCAGCGGC GGTAGCGGGA TTGGCCTCAC CATCGCCCGC
CATCTTGCAT GGGCAATGGG CGGAGACATC ACCGCCTACA GCGCCGGCCT CGGCAAAGGC
AGCCGGTTCA CACTGACCTT GCCGCACAGC GCAACCCACC CGTAG
 
Protein sequence
MLQFWRQLRW QIIGAQMLVV IVGVVTLNLT ANALLEQTVP PEQFTTVHTA VIQALTIAAI 
AATIAGLTTS ILLVQVILRS LRSIAHSSQR IAAGRYDERV NVPASDELRA VAESFNQMAE
ALEQIEQRRV TMIGNVAHEL RTPLAGIEGY LEGLIDGVLP AEADTFLEMK HEVRRLHRLV
DDLQTLSRVE AGQISLHFTT FDINEVIRHV VSQLQPQVLD GCLKIICERT DQPILTRADP
DRVAQILLNL LGNAVRYTPE GGCITVRSDL VNEWVKVTVE DTGIGIAPEH LPYIFERFYR
ADPSRSRASG GSGIGLTIAR HLAWAMGGDI TAYSAGLGKG SRFTLTLPHS ATHP