| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_1179 |
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| Symbol | |
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| ID | 7267928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chloroflexus aggregans DSM 9485 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011831 |
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| Strand | + |
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| Start bp | 1454377 |
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| End bp | 1455030 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643566022 |
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| Product | lipopolysaccharide biosynthesis protein |
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| Protein accession | YP_002462524 |
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| Protein GI | 219848091 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3944] Capsular polysaccharide biosynthesis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00790921 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAAATCC GCGACTATGT AAATGTGTTG CGTAAACGCT GGTGGGTGAT TGCATTTACC
GCCATCGCCG CAATTGCCGG CGCGTACATG GTTAGCAAGC TACTGTCCCA AACGTTTCGC
ACGCAAGCAG TATACCTTGC GTTGGCAAAC CAGGCCGACA ATGGCCTGAA CATCGTGCTG
CGCAATTCGA TGAATAGCTA TCGTGAATTG GTGATGCAGC CCAGCGTCCT CGACCAGATC
AGCCAACAGA TCGGCCTCGA TATAAGCGGC GAACGATTAA TGGAAGACGT TAACATCCAA
CCTCGCCCTG ACGAACAGAA GATCGTGATC GAGGTCGATC TTCCCCGGCT CGATCAGTCA
CAAGCACTCG CCGACGCGGT TGGTGAGCGG ATTGTCGCCG AAGTCAACCG GATCAATGCC
ACCCTTGAAG GGACGGCACG CATCAACGTA ACCCGCATCC AACCCGCCCG GCTGGTTGAA
ATTCGACCCA ACACGCGCAT TAATATGCTG GCCGGCGCCA TCCTGGGCTT AGTCGTCGGT
CTTGTGCTTG CCTTTGTGTT AGAGTACCTC GACGATACGC TGAAATCGTC GGAGGATGTC
GAGCGTTTTG TCGGCTTGCC GACCCTCGGC GCAATTCCAA TCGCCGAAAA ATAG
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| Protein sequence | MEIRDYVNVL RKRWWVIAFT AIAAIAGAYM VSKLLSQTFR TQAVYLALAN QADNGLNIVL
RNSMNSYREL VMQPSVLDQI SQQIGLDISG ERLMEDVNIQ PRPDEQKIVI EVDLPRLDQS
QALADAVGER IVAEVNRINA TLEGTARINV TRIQPARLVE IRPNTRINML AGAILGLVVG
LVLAFVLEYL DDTLKSSEDV ERFVGLPTLG AIPIAEK
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