Gene Cagg_1173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1173 
Symbol 
ID7267922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1446547 
End bp1447254 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content60% 
IMG OID643566016 
Productiron (metal) dependent repressor, DtxR family 
Protein accessionYP_002462518 
Protein GI219848085 
COG category[K] Transcription 
COG ID[COG1321] Mn-dependent transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.990595 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0494432 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACGCCTG TCGAAGATCC TAACCTGCCC GGACGGATTA CGCCGGCTAT CGAAGATTAT 
CTGAAAGCGA TCTATCTGCT GCAACAGCAG GTCGGTGCGG TCACAACGAC GTTGCTCGGT
GAACAACGTG GTTCGCGGCC GGCATCCGTC ACCGGGATGA TCAAGAAGCT GGCCGAGATG
AATCTGGTGC AGCATACACC GTATCAGGGG GTTGTGTTGA CACCGGCCGG CGAACGGATT
GCGTTGGAAG TGATCCGCCA TCATCGCCTC CTCGAGCTGT ATCTGGTCGA AGCGCTCGGT
TATAGCTGGG ACGAAGTTCA TGAAGAGGCC GAGCGGCTTG AACACCACAT TAGTGAGAAG
CTCGAGGCGC GGATCGCCGA ACGGCTGGGG TATCCCGATT TCGACCCGCA CGGTGATCCT
ATACCGGGTA TTGATGGAGT GCTGCCGGTA ACCCATGCGA TCAGGCTGGC CGATGTGCCG
CTCCATCAGG CTGCCCGGAT TGTGCGTGTC CGTGATCAGG CTGCCGAGCG GTTGCGCTAT
CTGGCCGATT TGGGGTTAGT CCCCGGTGCG CATGTGGTCG TTACCGCCAG TGCGCCGTTC
GATGGCCCAT TGATGGTGCA GATCGGTGAG GCCGACCCTA TACCGCTCGA CCGCCGTCTG
GCGCGGACTA TCGAGGTGAT AACCGAAGAT GCGTCGTCAT CGGGCTGA
 
Protein sequence
MTPVEDPNLP GRITPAIEDY LKAIYLLQQQ VGAVTTTLLG EQRGSRPASV TGMIKKLAEM 
NLVQHTPYQG VVLTPAGERI ALEVIRHHRL LELYLVEALG YSWDEVHEEA ERLEHHISEK
LEARIAERLG YPDFDPHGDP IPGIDGVLPV THAIRLADVP LHQAARIVRV RDQAAERLRY
LADLGLVPGA HVVVTASAPF DGPLMVQIGE ADPIPLDRRL ARTIEVITED ASSSG