Gene Cagg_1172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1172 
Symbol 
ID7267921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1445497 
End bp1446558 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content57% 
IMG OID643566015 
ProductPHP domain protein 
Protein accessionYP_002462517 
Protein GI219848084 
COG category[R] General function prediction only 
COG ID[COG0613] Predicted metal-dependent phosphoesterases (PHP family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0555616 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTACC CCTTCATCTA TCCCGGCGCC ATTCACATGC ATACCACCTA TTCAGACGGC 
TCGGCCACGT TTCCCCACCT GATCGCCGCA GCCCGTGAGG CTGGTCTGCG ATGGGTGATC
GTCACCGACC ACGACACACT TGAGGGACTA CCGTTCGCCG GCTGGCACGA CGATGTGTTG
GTCATCGTCG GTCACGAAAT CACTCCCGAC CACAACCACT TCCTCGCTCT CAACGTCGAT
TCTGTGATCA GCAACGAGCT GCCACCTCAG CAGTTTATCG ATGAGGTTTA TCAGCGGGGT
GGATTTGGCA TCATTGCCCA TCCCGACGAA CGGGTACGAA ATTCCTTCAA AGACATCTAT
CGCTGGGACG ATTGGACCAT CGACGGGCCA ACCCAACGCG AGGGGCGCGT GGTTGGGCTT
GAGTTATGGA ATCTGATGAG TGACTGGGGC GAACACCTGA CCGATCGCAA CAAACTGGCG
CTCGTGCTCA ACCCACGTCT CGGCTTCAGC GGGCCAACCC TTGCTACGCT TGCATGGTGG
GATCGGTTGA ACATGGTTGG CCGACGCACC TTTGGCATAG GTGGCGTTGA TGCACACGGC
TTTAAGCGCC GTGCGCCGTG GGGTGAAATT GAAGTCTTTC CCTACCCGTG GATCTTCCGT
ACCCTTACCA ACTACATCCT GTTGCCCGAA CCGTTTAGCC CTGATGCTAC CGTTGCGACC
AACCAAGTCT ACGCCGCCCT TACGGCCGGT CGTTGCTATT TTGTCAACCG GCTGGATGGT
GATGCACCAT CGATCATCTT TCGTCTCAGT CGACCCGGCC AAGTGGCCGA AATGGGCGAT
ACCATTAGCC TTGCTGATGG GCCATTGCTG GTTGAGATTG ATGTTGGCGC CGATGCCTAT
ACCCGCCTCA TCGTGAATGG CGAAGTCATG ACCAGCGGTA TTCGCCGCAT CCGACAGACG
ATCACCGATG ACGGCGTCTA CCGCGTTGAG GCCTACTGGG GCGGCAAACC GTGGCTCTTT
ACCAACCCGA TTTTCGTCAC CGCTGCCGAA TCAGCCCGAT GA
 
Protein sequence
MNYPFIYPGA IHMHTTYSDG SATFPHLIAA AREAGLRWVI VTDHDTLEGL PFAGWHDDVL 
VIVGHEITPD HNHFLALNVD SVISNELPPQ QFIDEVYQRG GFGIIAHPDE RVRNSFKDIY
RWDDWTIDGP TQREGRVVGL ELWNLMSDWG EHLTDRNKLA LVLNPRLGFS GPTLATLAWW
DRLNMVGRRT FGIGGVDAHG FKRRAPWGEI EVFPYPWIFR TLTNYILLPE PFSPDATVAT
NQVYAALTAG RCYFVNRLDG DAPSIIFRLS RPGQVAEMGD TISLADGPLL VEIDVGADAY
TRLIVNGEVM TSGIRRIRQT ITDDGVYRVE AYWGGKPWLF TNPIFVTAAE SAR