Gene Cagg_1169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1169 
Symbol 
ID7267918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1439955 
End bp1442384 
Gene Length2430 bp 
Protein Length809 aa 
Translation table11 
GC content59% 
IMG OID643566012 
ProductATP-dependent protease La 
Protein accessionYP_002462514 
Protein GI219848081 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0466] ATP-dependent Lon protease, bacterial type 
TIGRFAM ID[TIGR00763] ATP-dependent protease La 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0714887 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0235263 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGA CTCCGACAAA CGAACAATCA TCATCACCCT CTGCCGGCAC TATCTTGTAC 
GAGCGGCCGG TGTTGCCGCT CCTCGACAGT GTGCTCTTTC CGCAGATGCT GGCGCCGCTC
TTTGTCAGTG ACGAGCGCGC GATCAATGCG GTCGAGCAGG CTGCTGCCGG TGATCGGATT
GTGCTCGCCG TAGCTGCTCG CGGCCCGATC GAAGACTTTT CAATCGGGAT CAATGATCTC
TATACGGTCG GCGTGGAAGC CATTGTGCAG CGGGTTCGAC GTTTGCCCGA CGGCACCCTC
AGTATTGTGC TTGAGGGGCG TCAGCGGATG CAGATTGTAA GTGTCGTCAG TGAGCAACCG
GCTCTGCGCG TGCTGGCTAC ACCGCTTGAA ACGCCACCCC TCGACGACGA TGCTGCGTTG
ATGGTTGAGG CACTCAGTCG CACGATCCTC ACTACCTTCG AGAAGATTGT ACGCCTGTCG
CGCAATTTGC CCGACGACGC CTATCTGTCC GCGCTCAACA GCGCCGAACC GGGTGAGTTG
GCCGATGTTA TTGCAGCTCT GCTGCCCATC TCGGTGGAAG AGCGGCAAAA GATTCTCGAA
CTGGTTGATA TTGAGCAACG GCTGCGCCAT CTTGAAGTCT TGCTCGCCAA AGAACTTGAC
CTGCTCGAAC TTGAAAACCG CATCCATAGC CAGGTACAGC AAGAGGTCGA TCGCAGCCAG
CGTGAAATGT TCCTGCGCGA GCAGTTGCGC GCCATTCAGC GTGAACTCGG CCAAGAAGAC
CCATCGCGCC GTGAGATTGC CCTCTTGCGC GAACGCGCCG CCGCCGCCGG ATTACCACCT
TACGCTATGG CCCGGTTTGA AGAAGAATTG GCGCGGCTCG ATCTCATCTC GCCGATGTCA
CCCGAACACG GCATGCTGCG CACCTACCTC GATTGGCTGA TTTCGCTACC CTGGAGCAAC
GCTAGCCCGG AAAATCGTGA CCTGCGCGCA GCAGCGGAAG TACTCGAACG CAATCACTAC
GGCTTGCGCA AAGTCAAAGA TCGCATCCTC GAATATATCG CCGTGCGCCA ACTGGCCGGC
CCGGCCCGCC GCGCCCCTAT CCTCTGCTTC GTCGGCCCAC CCGGTGTTGG CAAGACGAGT
CTCGGCCAAA GCATCGCCGA GGCGCTTGGT CGCCGCTTTG TGCGCCTCAG CCTTGGTGGC
GTTCACGACG AAGCCGAGAT TCGCGGCCAT CGCCGCACCT ACATCGGTGC TCTGCCCGGA
CGCATTTTGC AGCGTATGAA GGTAGCCGGC ACCATCAACC CGGTCTTCAT GCTCGACGAG
GTTGATAAGC TTGGTAGCGA TTTTCGTGGC GATCCGGCAG CCGCGTTGCT CGAGGTGCTC
GATCCCGAAC AGAATAGCAC CTTCAGCGAT CACTATCTCG ATCTACCTTA CGACCTCAGC
CAGACGTTGT TCATCACGAC GGCCAATGTC GCTGATGCGA TCCCTGAAGC GCTGCTCGAC
CGGATGGAGT TGGTGGAGCT ACCCGGCTAT ACCGAAGATG AAAAGTTGTA CATCGCCCGG
CGCTTCCTTA TTCCCCGTCA AATGGCCGAC AGTGGCTTGC CGCCGAAAAC GATCCGGCTA
AGTAACGAGA CGATCCATAC GATCATTCGC CACTACACCT ATGAAGCCGG GGTGCGCAAC
CTCGAGCGTG AAATCGGGGC TATTTGTCGC AAAATTGCCC GTCGGATCGC CGAAGGAAAA
CACCATCCGC GCCGGATTAC CCCGCGTGCC CTTCCCAAAC TGCTTGGGCC ACCCCGCTTT
GAGATCGGCA AGATCGAACC GCACGATCAG GTCGGTGTGG CCATTGGGAT GGTCTACACC
AGTGCCGGCG GCGATATTAT GCCGGTTGAA GTCGTGTTGA TGGACGGTAA AGGTAATCTG
ATCCTGACCG GTCAGCTTGG GGAAATCATG CAGGAGTCGG CGCAGGCTGC ACTCTCGTTC
GCCCGCGCCA ATGCGACACG CCTCGGGATC GAGATTCGCC ATTTCGATAA GATCGATGTG
CATGTGCATG TACCCGAAGG TGCTACCCCC AAAGATGGGC CATCGGCAGG GATCACTATC
GCGATCGCGC TCATCTCGGC ACTCACCGGG CGCAAGGTAC GGCACGATGT TGCCATGACC
GGTGAAATTA CCCTTCACGG GCGGATTTTG CCGATCGGTG GCGTCAAAGA GAAGGTATTG
GGGGCGTATC GCGCCGGCAT TCGCCAGATT ATCTTACCCA AACGCAACGA GCACGATCTG
GTTGAGATAC CGCCAACGTT GCGCCGACAA CTCACCATTC ACCTCATTGA GCGCATCGAG
CAAGCGATCG ATCTTGTGCT GGGGCCACCA CCACCCAAAG AACCACGTCG TGCCCCCCGT
GTCATCCCCC GCCAAGCCGA AGACGAGTAG
 
Protein sequence
MTTTPTNEQS SSPSAGTILY ERPVLPLLDS VLFPQMLAPL FVSDERAINA VEQAAAGDRI 
VLAVAARGPI EDFSIGINDL YTVGVEAIVQ RVRRLPDGTL SIVLEGRQRM QIVSVVSEQP
ALRVLATPLE TPPLDDDAAL MVEALSRTIL TTFEKIVRLS RNLPDDAYLS ALNSAEPGEL
ADVIAALLPI SVEERQKILE LVDIEQRLRH LEVLLAKELD LLELENRIHS QVQQEVDRSQ
REMFLREQLR AIQRELGQED PSRREIALLR ERAAAAGLPP YAMARFEEEL ARLDLISPMS
PEHGMLRTYL DWLISLPWSN ASPENRDLRA AAEVLERNHY GLRKVKDRIL EYIAVRQLAG
PARRAPILCF VGPPGVGKTS LGQSIAEALG RRFVRLSLGG VHDEAEIRGH RRTYIGALPG
RILQRMKVAG TINPVFMLDE VDKLGSDFRG DPAAALLEVL DPEQNSTFSD HYLDLPYDLS
QTLFITTANV ADAIPEALLD RMELVELPGY TEDEKLYIAR RFLIPRQMAD SGLPPKTIRL
SNETIHTIIR HYTYEAGVRN LEREIGAICR KIARRIAEGK HHPRRITPRA LPKLLGPPRF
EIGKIEPHDQ VGVAIGMVYT SAGGDIMPVE VVLMDGKGNL ILTGQLGEIM QESAQAALSF
ARANATRLGI EIRHFDKIDV HVHVPEGATP KDGPSAGITI AIALISALTG RKVRHDVAMT
GEITLHGRIL PIGGVKEKVL GAYRAGIRQI ILPKRNEHDL VEIPPTLRRQ LTIHLIERIE
QAIDLVLGPP PPKEPRRAPR VIPRQAEDE