Gene Cagg_1158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1158 
Symbol 
ID7267907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1427940 
End bp1428587 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content56% 
IMG OID643566002 
Productprotein of unknown function DUF1405 
Protein accessionYP_002462504 
Protein GI219848071 
COG category[S] Function unknown 
COG ID[COG4347] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.605934 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000146418 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGCTACA TTCGTCCATT TATCGACTGG ATATATGCAT TCATTACTGG CCACCCGTTC 
ATTTTCTGGA CATGCATGAC CCTCAATCTG TTTGGCGTCG TGTGGGGCGG CATCGTCTGG
TATGGGCCAA TGCTGGTCTC CTCGCCACCT TGGGCCTGGA TCTTCATTCC CGATTGCCCG
GCAGCCGCCC TCTACGCCAC CATCGCGTTT ATCCTGATCC GCTATGGCCG CGCCGTGCCG
TGGTTCACCG CCTTCGCCGC TTTTGCTTGT ATTAAGTATG GTCTGTGGAC ACTCGCCTTC
TGGTCACGCC ACTGGCTCGG TGCCGGTACA GTCGAACCAC TCGAACTGAT GTTGTTCGTA
TCACACATTG GCTTGACGTG TGAGGGTATA CTCCTCGCAA CCCGCATCGG ACGGCTTAGC
ATGACCGCAC GCGCCGCAGT CGCTGCCTTT TTCAGTCTGT CGATCTTCGT TGATTACGGC
CTTGGGTATC ACCCGCCGCT GACGTGGGTA GTGACGCCGG CATTCGCAAT GTGGACGGCA
GTTATTTTGA CCAGTGTGCT CGGCTTCTGG CTAACCCGAC CATCGGTGGC GGTAGCCCAA
CAGATTGAAG CGCGTGGGTT GCAGCTTGAG AAAGGGGTAC AAGACTAA
 
Protein sequence
MRYIRPFIDW IYAFITGHPF IFWTCMTLNL FGVVWGGIVW YGPMLVSSPP WAWIFIPDCP 
AAALYATIAF ILIRYGRAVP WFTAFAAFAC IKYGLWTLAF WSRHWLGAGT VEPLELMLFV
SHIGLTCEGI LLATRIGRLS MTARAAVAAF FSLSIFVDYG LGYHPPLTWV VTPAFAMWTA
VILTSVLGFW LTRPSVAVAQ QIEARGLQLE KGVQD