Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_1158 |
Symbol | |
ID | 7267907 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | + |
Start bp | 1427940 |
End bp | 1428587 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643566002 |
Product | protein of unknown function DUF1405 |
Protein accession | YP_002462504 |
Protein GI | 219848071 |
COG category | [S] Function unknown |
COG ID | [COG4347] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.605934 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000146418 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGCTACA TTCGTCCATT TATCGACTGG ATATATGCAT TCATTACTGG CCACCCGTTC ATTTTCTGGA CATGCATGAC CCTCAATCTG TTTGGCGTCG TGTGGGGCGG CATCGTCTGG TATGGGCCAA TGCTGGTCTC CTCGCCACCT TGGGCCTGGA TCTTCATTCC CGATTGCCCG GCAGCCGCCC TCTACGCCAC CATCGCGTTT ATCCTGATCC GCTATGGCCG CGCCGTGCCG TGGTTCACCG CCTTCGCCGC TTTTGCTTGT ATTAAGTATG GTCTGTGGAC ACTCGCCTTC TGGTCACGCC ACTGGCTCGG TGCCGGTACA GTCGAACCAC TCGAACTGAT GTTGTTCGTA TCACACATTG GCTTGACGTG TGAGGGTATA CTCCTCGCAA CCCGCATCGG ACGGCTTAGC ATGACCGCAC GCGCCGCAGT CGCTGCCTTT TTCAGTCTGT CGATCTTCGT TGATTACGGC CTTGGGTATC ACCCGCCGCT GACGTGGGTA GTGACGCCGG CATTCGCAAT GTGGACGGCA GTTATTTTGA CCAGTGTGCT CGGCTTCTGG CTAACCCGAC CATCGGTGGC GGTAGCCCAA CAGATTGAAG CGCGTGGGTT GCAGCTTGAG AAAGGGGTAC AAGACTAA
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Protein sequence | MRYIRPFIDW IYAFITGHPF IFWTCMTLNL FGVVWGGIVW YGPMLVSSPP WAWIFIPDCP AAALYATIAF ILIRYGRAVP WFTAFAAFAC IKYGLWTLAF WSRHWLGAGT VEPLELMLFV SHIGLTCEGI LLATRIGRLS MTARAAVAAF FSLSIFVDYG LGYHPPLTWV VTPAFAMWTA VILTSVLGFW LTRPSVAVAQ QIEARGLQLE KGVQD
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