Gene Cagg_1152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1152 
Symbol 
ID7267900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1418801 
End bp1419988 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content58% 
IMG OID643565995 
Productbeta-lactamase domain protein 
Protein accessionYP_002462498 
Protein GI219848065 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases
[COG0607] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000210846 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000422487 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACGTTCA CGCAGGATCA ATCGACTGTT ACTGAAATTT CTCCCCGCGA ACTGTATGCC 
CGCCTGTTGA GCGCACAACC GTTGTTCATT CTCGACGTGC GCAACGAGGA CGAGTTCAAG
CGTATGCCGA TCGAGGGGCA TGCGACGCTG CGCACCCTCA ATCTGCCCTA CTACGACTTT
ATTGAAGACG AAGAGGCGGC GTTGGCTCGT ATGCCAAACG ATGTTGAAGA GGTTATCGTT
ATCTGTGCCA AGGGTGGTTC ATCGCAGTAC GTCGCTGAAA TCCTGAATAA TCACGGCTAC
CGTGCCGTCT CGGTGACGGA CGGGACAATC GGTTGGGGGA ACTATTACGA TGTGCGCGAT
GTGGTGAGCG CCACTTGGGG TCGGATTGTG CAGATTGCCC GCCCCGCCCG CGGCGACCTC
AGCTTCGCGA TTATCAGCGA TGGACAGGCC GCGCTCATCG ACCCGCTCCG CCATACCAAT
GTCTACCGTG AGCTGATCGA AGGCGCCGGT GCGAAGTTGA CAACCATTCT CGACACGCAC
GTCCATGCCG ACCACATCAG CGGTGGTCCT GCGTTGGCGA AGGAAACCGG CGCACCGTAC
TACATCCATC CCTACGACGC CATTCACCCC ATCGATATGC TACCGGCGGT GATTGCCTAT
GAGCCGTTGC GCGATGGGCA GGTCTTCCAA ATTGGGCAGG TGCGGATCAC AACCATCTGG
TATCCGGGTC ACACCCTCGG CCAGGTCAAC TTTCTCGCCG AGACGCCGGA TGGTGGTCGT
TACCTGTTCA CCGGTGACGG TATCTTCTTG CGCTCGTTTG GTCGCCCCGA TTTGGGTGGT
AAGGGTGAAG CGTGGACGCC CATCCTCTAC CGCAGCATGT TCGAGTGGCT GCCACGTCAT
CTGACCGACG ACACAATGAT CCTACCGGCC CACTTCAGCA CCCTTGAGGA GGATGCCGGC
AATGGCATCT TTGCCGCGCC GTACAAGCAG GTGTTGGCGC GGAATGACAG CCTCAAGCCG
CGCACGCTGG AAGAGTTCAC GAGCTACGTG CTCAGCCACC TGCCGGTCTT CCCGCCGGAG
TACGTCGAGA TCAAGCGGGT GAACATTGGT CTGGTAGAAG CCTGCGATGG CAAAGCGAGC
GAATTGGAAT TGGGCAAGAA TATCTGTGCA TTGTCCGGGG AAAAGTGA
 
Protein sequence
MTFTQDQSTV TEISPRELYA RLLSAQPLFI LDVRNEDEFK RMPIEGHATL RTLNLPYYDF 
IEDEEAALAR MPNDVEEVIV ICAKGGSSQY VAEILNNHGY RAVSVTDGTI GWGNYYDVRD
VVSATWGRIV QIARPARGDL SFAIISDGQA ALIDPLRHTN VYRELIEGAG AKLTTILDTH
VHADHISGGP ALAKETGAPY YIHPYDAIHP IDMLPAVIAY EPLRDGQVFQ IGQVRITTIW
YPGHTLGQVN FLAETPDGGR YLFTGDGIFL RSFGRPDLGG KGEAWTPILY RSMFEWLPRH
LTDDTMILPA HFSTLEEDAG NGIFAAPYKQ VLARNDSLKP RTLEEFTSYV LSHLPVFPPE
YVEIKRVNIG LVEACDGKAS ELELGKNICA LSGEK