Gene Cagg_1148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1148 
Symbol 
ID7267896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1416837 
End bp1417331 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content56% 
IMG OID643565991 
Productprotein of unknown function DUF442 
Protein accessionYP_002462494 
Protein GI219848061 
COG category[S] Function unknown 
COG ID[COG3453] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01244] conserved hypothetical protein TIGR01244 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000013727 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000203259 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAGGATC AACTTTGCAA TGCCTTACAG CACCAAACTG AGATCGCACC GCTGCGCAGC 
TATGCTGTTA CCGATCGGGT ATTGCTGGCA GCGCAGCCAC AGCCAGAAGA TTGGCAACGT
TTTGTGGCAG CGGGTTACAA AACTGTCTTG AATATTCGCA GTGATCCCGA ACGGGCAGCC
GTGCAAGCAG CTAACGCTCG TGCTGCCGGT TTACACTACA TTCACGTACC ATGGCCGGCC
TACGAATTGG AGCCGGAGCA TCTGGCCGAG TTTGCTCGGA TTGTCGAAGC TCCGGAAACC
GGTAAGCTGG TGTTTCATTG CCGCAGTGCC ACCCGCGTCG GTCTGATTTG GATGCTCTAT
CGGATCGTGC ATCAGGGTTG GACGCGCGAA CAGGCTGAGG CCGAACTACG CGCTGCCGGT
TACGATGATG AGGCAATGGC AACTTTTGAG TTCTGCGCCG ACGATTTCTT TGAGCGGAGC
GGCATGCAGA GGTAA
 
Protein sequence
MQDQLCNALQ HQTEIAPLRS YAVTDRVLLA AQPQPEDWQR FVAAGYKTVL NIRSDPERAA 
VQAANARAAG LHYIHVPWPA YELEPEHLAE FARIVEAPET GKLVFHCRSA TRVGLIWMLY
RIVHQGWTRE QAEAELRAAG YDDEAMATFE FCADDFFERS GMQR