| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_1142 |
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| Symbol | |
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| ID | 7267890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chloroflexus aggregans DSM 9485 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011831 |
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| Strand | + |
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| Start bp | 1411061 |
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| End bp | 1412110 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643565985 |
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| Product | hypothetical protein |
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| Protein accession | YP_002462488 |
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| Protein GI | 219848055 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3425] 3-hydroxy-3-methylglutaryl CoA synthase |
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| TIGRFAM ID | [TIGR00748] hydroxymethylglutaryl-CoA synthase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.448183 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000356194 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATGAAAC CGAACCAACC TGTCGGCATT ATCGGCTATG GCGTGTACAT CCCACGTTAC
CGGATCGCAG CGCGCGAAAT TGCTCGGATC TGGACAGACG GTCAGAATGG CGTCCCCGTG
GAGGCAAAGA GCGTTCCCGG CCCCGATGAA GACACGATTA CGATGGCAAT TGAAGCGGCG
CGTAATGCGC TGGTGCGTGC CGACATTCCG GCTAGCGCAC TCGGTGCGGT CTGGATCGGG
AGCGAAAGCC ATCCCTACAG CGTGAAACCA TCGGGGACGG TAGTAGCCGA CGCACTCGGC
GCCGGGCCAT GGGTGAGTGC CGCCGACTGG GAATTCGCAT GTAAGGCCGG CTCCGAAGCG
CTGACCGCGG CGATGGCACT GGTCGGCAGT GGGATGCAGC GCTACGCCTT GGCGATCGGC
GCCGACACTG CCCAGGGGCG TCCCGGTGAT GCGCTGGAAT ACACTGCTTC CGCCGGCGCA
GCAGCGTTGA TCGTTGGTCC TGCCACCGAA GCGTTGGCGA CCATCGATGC AACCGTCTCG
TATGTCACCG ATACCCCTGA CTTCTACCGC CGCGCCGACC GACCGTATCC GGTACACGGC
AACCGCTTCA CCGGCGAGCC GGCGTACTTC CACCAGATTC AATCGGCAGC CTCTGAATTA
TTACGTCAAC TCAACCGTAC TGCTGCCGAC TTTACCTATG CCGTCTTCCA TCAACCTAAT
GCGAAATTTC CCCAGACGGT TGCCAAACGA CTCGGCTTCA CCGATGCCCA AATCGCGCCG
GGATTGCTCA GTCCACAGAT CGGTAATACC TATTCGGGCG CCGCACTGCT AGGCCTGTGT
GCCATTCTCG ATGTCGCCAA ACCGGGCGAT ACCATCTTCG TAACGAGCTA CGGTAGTGGG
GCCGGTTCCG ACGCTTATGC CCTCACCGTC ACCGAAGCGA TTGTGGAGCG ACGCGAGCGA
GCGCCATTGA CGGCAGCGTA CCTCGCCCGC AAGGTGATGA TCGATTACGC AATGTATGCG
AAATGGCGCG GTAAGTTGGT GATGGGCTAG
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| Protein sequence | MMKPNQPVGI IGYGVYIPRY RIAAREIARI WTDGQNGVPV EAKSVPGPDE DTITMAIEAA
RNALVRADIP ASALGAVWIG SESHPYSVKP SGTVVADALG AGPWVSAADW EFACKAGSEA
LTAAMALVGS GMQRYALAIG ADTAQGRPGD ALEYTASAGA AALIVGPATE ALATIDATVS
YVTDTPDFYR RADRPYPVHG NRFTGEPAYF HQIQSAASEL LRQLNRTAAD FTYAVFHQPN
AKFPQTVAKR LGFTDAQIAP GLLSPQIGNT YSGAALLGLC AILDVAKPGD TIFVTSYGSG
AGSDAYALTV TEAIVERRER APLTAAYLAR KVMIDYAMYA KWRGKLVMG
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