Gene Cagg_1130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1130 
Symbol 
ID7268584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1396932 
End bp1397597 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content58% 
IMG OID643565973 
Productlipoate-protein ligase B 
Protein accessionYP_002462476 
Protein GI219848043 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0321] Lipoate-protein ligase B 
TIGRFAM ID[TIGR00214] lipoate-protein ligase B 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0209414 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACGT TGACCGTCTA CCATCTAGGC CACATAGATT ACACTGCGGC GTGGGAGATG 
CAGCGCCGGT TGGCCCGCCA ACGATCGAGC GGCCAGATCG GCGATACCCT CCTGCTGCTC
GAACATCCAC CGACGATCAC ATTGGGGAAC AAAGCCCGCC CCGAACACAT TGTAGCGACG
CCGGCTGAGC TAGCTGCGCG TGGGGTCGTT GTTGTCCAGA GCGATCGTGG TGGTGAAGTG
ACGTACCACG CGCCAGGGCA ACTCGTTGCC TATCCGATCT TCAAACTCTC GCAGCACGGG
AGCGATGTTG GGCGTTACGT GCGCGGCTTG GAAGAGAGTG TGATTCGCGT GTTAGCCGGC
TACGGCATCA CCGGTGAGCG CGTCAATGGA TTAACCGGGG TGTGGGTACG GGGTGGCGCA
GCCAAAATTT GTGCGATTGG TGTGAAGCTG AGCGCGAGTG GCGTCACAAC CCACGGCTTA
GCCTTGAATG TTGATCCTGA CTTGAGTGGG TTTGAACTGA TTGTACCCTG TGGAATCAGT
GATCGTGGTG TAACGTCGTT GGCGGTAGAA CTCGGTAAAG CGCCGCCGAT GGCCGAGGTA
GCCGACCGAT TAATCGCCTC CCTATGCGCG ATTTTTGATC TGCGACCGGT GAACGCTTTA
TCGTAG
 
Protein sequence
MRTLTVYHLG HIDYTAAWEM QRRLARQRSS GQIGDTLLLL EHPPTITLGN KARPEHIVAT 
PAELAARGVV VVQSDRGGEV TYHAPGQLVA YPIFKLSQHG SDVGRYVRGL EESVIRVLAG
YGITGERVNG LTGVWVRGGA AKICAIGVKL SASGVTTHGL ALNVDPDLSG FELIVPCGIS
DRGVTSLAVE LGKAPPMAEV ADRLIASLCA IFDLRPVNAL S