Gene Cagg_1125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1125 
Symbol 
ID7268579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1391128 
End bp1391910 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content60% 
IMG OID643565968 
Productconserved protein, VrlQ family 
Protein accessionYP_002462471 
Protein GI219848038 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0269901 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGTC GCCTGAACCA GATCGGTTTC AGTCAGCGGG TTCGTCTGGA GTGGCTGGAG 
CGCACGGCAA ACCTCGTGCT TGCCGGTAAT GATGAAGCCG CCATGTACCA TGACCTCCAA
GAGCTGCTCA AAGATAAACT ATCTGTTGGA GGGAACGCGA AACGCGGTAA TCGCGAGAAG
GTCATCACCA TCCTGATGAA GATTTGGGTG CGACCACCTC ACGAGCTGCT CCCCCTGCAC
CGAGAAGGTC TCAACCTTCT CGCCCGGCTT CCACGCGAGG AGCATATCGC AATCCACTGG
GGCATGGCGA TGGCAGTGTA TCCATTCTGG GGCAACGTCG CAGCGCAGGT CGGGCGACTG
CTCAGGCTCC AAGGATCGGT CACCGCCGGC CAGGTACAGC GCCGCGTGCG CGAGCAATAC
GGGGAACGTG ATACCGTATC GAGAGCGGCC CAACGGGTTC TCCGCAGCTT TGTCGATTGG
GGAGTTCTGA AGGAAACATC GGCGGCAAAA GGCATCTATA CCGCCGGGCT GACGCGCACC
ATCGATCAGG TGGAGGTTAT CGCATGGCTG GCGGAGGCCT TCTTGCACGC CCATCCTGGT
GGTTCGGTGG CGCTGAGAAG CCTTCTCGAT GCCACGAGTC TGTTCCCGTT CCATCTAAGA
TATGTTCCCG CAGCTCATCT GGTCGCGGTC TGCGACCGCA TCGACGTGCT CCGCCACGGT
CTCGATCAAG ACTTGGTTAT GCTCCGCCCG GAACGGCTGC TGGTGGCGCA GAGAGGTGAA
TGA
 
Protein sequence
MNRRLNQIGF SQRVRLEWLE RTANLVLAGN DEAAMYHDLQ ELLKDKLSVG GNAKRGNREK 
VITILMKIWV RPPHELLPLH REGLNLLARL PREEHIAIHW GMAMAVYPFW GNVAAQVGRL
LRLQGSVTAG QVQRRVREQY GERDTVSRAA QRVLRSFVDW GVLKETSAAK GIYTAGLTRT
IDQVEVIAWL AEAFLHAHPG GSVALRSLLD ATSLFPFHLR YVPAAHLVAV CDRIDVLRHG
LDQDLVMLRP ERLLVAQRGE