Gene Cagg_1115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1115 
Symbol 
ID7268568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1373153 
End bp1373977 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content62% 
IMG OID643565957 
Productribosomal RNA methyltransferase 
Protein accessionYP_002462461 
Protein GI219848028 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00124372 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000459659 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGAGCAAA CTGATCCCCG CCTTGCCACG TTGGTGGCGG CGGTACAAGC CGGTGCGAGC 
TATCGCTCAA TCGCTGTCGG TGTCATCGAA CGGGTGGGAC GTGAGTCGCT CCAGCGCTAC
CCCTCGTTGA AGGCAGCGAT TAAAGCGACC AAAACCCGCT TGCACCAGAT GATCGGTGCG
TATACCGAAG ATCGCCCGCC GTATCGGCAA TGGCTGGCGG AGTTGCAGCA GGTGGCAGAT
GAGATGGCGC GCAAGGCGGT ATGTCGGCGG TTGTTGGCCG GCCATGCCTC GACCCGCGAA
CGATTGCCGG TCCTCGAACA TCTCTACCCG GCCTGTTTCG GTGATTCGCC ACCGCAGCGC
GTACTCGATT TGGGGTGTGG ACTGCATCCC CTCGCTGTGC CGTGGATGCA TCTGCCACCG
AACGCTTATT ACGCGGCCTA CGATATTGAT ACAGCGCTCT GCGCGTTTTT GCACGAGGCG
TTGCCGTTGC TGGGTGTGCG TGGCGAAGCC GCCATCTGCG ATTTGATGTT GGGGCCGCCA
CCGGTGTCGG CTGATGTTGC GCTCGTTTTG AAAACGATCC CGCTGCTCGA ACAACAACGG
CGCGGCGCCG GCGCCGATCT CCTGCGCGCT ATCCAAGCTC CTAGGCTCGT GGTCTCGTTC
CCGACCCGCA GTTTAGGCGG GCGCAATGTG GGTATGGCGA CCACCTACCG CGGCTACATG
GATGCACTGA CCGCCGCCGA AGGTTGGTCG CCCCGTGTCA TCGAGTTGCC CAACGAGCTG
GTGTTTGTGA TTGAGCGTCA CACTCCCTCG CGTTCGCGGA TGTAG
 
Protein sequence
MEQTDPRLAT LVAAVQAGAS YRSIAVGVIE RVGRESLQRY PSLKAAIKAT KTRLHQMIGA 
YTEDRPPYRQ WLAELQQVAD EMARKAVCRR LLAGHASTRE RLPVLEHLYP ACFGDSPPQR
VLDLGCGLHP LAVPWMHLPP NAYYAAYDID TALCAFLHEA LPLLGVRGEA AICDLMLGPP
PVSADVALVL KTIPLLEQQR RGAGADLLRA IQAPRLVVSF PTRSLGGRNV GMATTYRGYM
DALTAAEGWS PRVIELPNEL VFVIERHTPS RSRM