Gene Cagg_1114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1114 
Symbol 
ID7268567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1372704 
End bp1373180 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content57% 
IMG OID643565956 
Productprotein tyrosine phosphatase 
Protein accessionYP_002462460 
Protein GI219848027 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000797417 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000387087 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGTCGCGTA ACATCCGAGT GTTATTTGTC TGTATGGGCA ATATTTGTCG CTCACCGATG 
GCCGAAGCCG TGTTTCGCCA TTTGGTCACC GAAGCCGGCC TTCAAGACCG TTTCGAGATC
GATTCTGCCG GTACCGGCGG CTGGCATGTT GGTGAGCCGC CACATCCGGG GACGCAGCGG
GTACTGGCCC GTCACCAGAT TTCCACCGCC GGGATGCGGG CGCGGCAGGT ACGGTCTGCC
GATATTGACC AGTTCGACTA TATTTTGGTC ATGGATCACG ACAATCTGGC CGACCTGGCG
CGTTTTCACC CCAAGGCCCG CGAACGCGCA AAGCTGTTGT TGAGTTTTGC GCCGGAATTA
GGCGTTGACG AGGTACCTGA TCCCTACTAC AACGGTCGCT TCGATGAAGT GTATCGCTTG
ATCGAGACGG CGTGCCGCAA TTTGTTAGCC TACATCCGCG AACGCGAGGG AGTGTGA
 
Protein sequence
MSRNIRVLFV CMGNICRSPM AEAVFRHLVT EAGLQDRFEI DSAGTGGWHV GEPPHPGTQR 
VLARHQISTA GMRARQVRSA DIDQFDYILV MDHDNLADLA RFHPKARERA KLLLSFAPEL
GVDEVPDPYY NGRFDEVYRL IETACRNLLA YIREREGV