Gene Cagg_1085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1085 
Symbol 
ID7268537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1342551 
End bp1343312 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content58% 
IMG OID643565930 
Productprotein of unknown function DUF81 
Protein accessionYP_002462435 
Protein GI219848002 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000944956 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000242116 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGAACTCT TCGATCTCGC CTTAATCTTT ACCGCTGCAT TGCTGGCCGG TGCATTGAAC 
GCGATTGCCG GCGGCGGTAG CTTCTTTTCT TTTCCAGCCC TTTTAGTCGC CGGCGTGTCA
CCAATCGTCG CCAATGCGAC AAATGCGTTG GCACTCTGGC CGGGCACGCT GGCGAGTGTC
GGTGCCTACC GGCGCGAGCT GAGTGGTCAA CGGAACGACA TTTGGCTCTT CAGCGGGTTG
AGCCTGATCG GTGGACTGCT CGGTGCGCTG TTGTTACTCG CTACCGATGA ACAACGTTTT
ACCGCCTTGA TCCCGTACCT GTTACTCTTC GCCACCCTGA TCTTTACCTT TAGCCCACAG
ATCACCACCG TAGCCCAACG GCTGGTCGGT CATGGCAGTC GTCAGCAACG CCTGTTGGTT
ACGGTTGTCT ATTTTGCCAT TGCCATCTAC GGTGGTTTTT TTGGTGCCGG ACTGGGGATT
CTCACCCTCG CGGCTTTGGC CTTGCTCGGT CACGACAACA TTCATCGGAT GAATGCGCTG
AAAACTTTGC AGGCGGCGCT CGTTAACGGG ATTGCGGTGG CGACCTTCGT TGCCACCGGC
TTGATCGCGT GGCTACCGGC CCTGATCATG ACGATCGGCG CGATCGCCGG CGGCTATGGC
GGTGCGGCGA TTGCCCGCCG CATAGACGCC CGCCGGGTTC GCACCGTGGT TGTGTGGATC
AGCATCGGTT TGACGGTCTG GTTTTTTGTG CGTGCATCCT GA
 
Protein sequence
MELFDLALIF TAALLAGALN AIAGGGSFFS FPALLVAGVS PIVANATNAL ALWPGTLASV 
GAYRRELSGQ RNDIWLFSGL SLIGGLLGAL LLLATDEQRF TALIPYLLLF ATLIFTFSPQ
ITTVAQRLVG HGSRQQRLLV TVVYFAIAIY GGFFGAGLGI LTLAALALLG HDNIHRMNAL
KTLQAALVNG IAVATFVATG LIAWLPALIM TIGAIAGGYG GAAIARRIDA RRVRTVVVWI
SIGLTVWFFV RAS