Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_1080 |
Symbol | |
ID | 7268532 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 1336779 |
End bp | 1338584 |
Gene Length | 1806 bp |
Protein Length | 601 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643565925 |
Product | ABC transporter related |
Protein accession | YP_002462430 |
Protein GI | 219847997 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | [TIGR02204] ABC transporter, permease/ATP-binding protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00169898 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGCGATTAC GATGGCAATT CATCCGCTCA CCTGCGCTAC CGGAAAGCGC TCAGTGGTCG CGCCTGCTCG GCTATCTGCG ACCATACCGG GGCTGGATGA TCGTTGCGGT AGTGGCGATG GTCATCGGTG CTGCCTTGGG TTTGGTGATG CCATTAGCAA TTGGTCAGAT GGTCAACCTG ATCACCGGTG ATCAGACGTT GCCGATTGGG CGCATTGCCG TGTTGTTAGG TGGAGTGGCT GTTGGGCAGA CAGTTGCCGG TCTGATTCAG AATTATAGTC TAACCTTCGT CGGTGAGCGG GTCGTTGCCG ATCTCCGTCT TGCCGCGTAT CAGCATCTCC AACGGCTGGA CCTCGCGTTC TTCGAGCAGC GCCGTACCGG TGAAATCACG TCGCGGATTA CCAACGACGT GACGTTGATC CAATCGACGG TGACGACCAA CCTGACCACG CTGCTGCAAG GTATGATTCA ATTGATCGGT GCCATTGCGT TGATGATCGT GGTCTCGTGG CAACTCAGTG CGTTGGCACT GGTTTTGGTA CCGACGCTCG TCTTGATTGC CGTGTTCTTT GGGCGCTGGT TGCGGCGAAT CTCGACAACG GTACAGGACC GATTGGCCGA TGCAACCAGT ATTCTTGAAG AAACGGTTTC CGGTGTGCGG GTGGTGCGTT CGTTTGGACG CGAACCGTAT GAGGTTGAGC GATTTCGCAC GGCAGTGGAG GCTACGTTTG CTGCGGCAAT GAGGCGGGCG TGGGTCCGTG CGCTCTTTCA GCCATCGATG TCGTTGGCCG TGTGGGCAAC GATCATCGGT ATGTTGGTCG TGGGTGGGTA TCTGGTAAGT ACTGGCGAGT TAACGCCGGG GAATCTGGTG GCGTTTCTGT TCTACGCCGG GATCGTCGCC GGATCGATGG GCGCGTTTGC CGGCCTGTTT GGGCAGGTGC AAGAGGCGCT CGGTGCGGTT GCGCGCGTCT TCGAGCTACT CGATCAACAG CCGGCAGTTG CCGATGCGCC TGATGCCATT CCGTTGCCAC CGGTGCAAGG GCGGGTTGAG TTCCGCAATG TATCGTTCGC GTATCAGCGA GTCGAAAACG GTCACACTGC GCCAATCGTG CTCCGCAATT TCTCGCTGGT GATCGAGCCG GGTGAGATGG TAGCGCTCGT CGGGCCGAGC GGTGCCGGCA AGAGCACCAT CGTAAGTCTC ATCCCGCGCT TTTACGATGT GCAGGATGGC AGTGTGCTCA TCGACGGCTA CGATGTGCGC CGGGTGCAGA TGCAGTCGCT GCGTACACAG ATCGGAATTG TGCCGCAAGA AACCCTGCTG TTCAGCGGCA GTATTCGCGA CAACATTCGC TATGGCCGGC TCGATGCCGA TGATGCGGAG ATCGAAGCCG CAGCGAGGAT GGCTAATGCC CATGAATTTA TCTGTCAGCT TCCCGAAGGT TACGACACCC CGGTCGGTGA ACGGGGGGTA CGCCTTAGCG GTGGTCAGCG CCAGCGTATC GCGATTGCCC GTGCCATCTT GAAAAATCCG CGGATCTTAA TCCTCGACGA AGCGACCAGT TCACTCGATA GTGAGAGCGA GCGATTGGTC CAAGAGGCGC TCGAGCGCCT GATGGTGGGA CGGACAAGTA TCATTATTGC CCATCGCTTA AGCACGATAC GACGTGCTGA CCGGATTGCC GTGATCGTTG CCGGTGAATT GATGGAGATC GGTACCCATC GTGAATTATT GACCCGTGGC GGGATCTACG CCCGTCTCTA CGAATTGCAA TTCCGTGATC CTGCCCCGGT GCTCGCAGTG GGTTGA
|
Protein sequence | MRLRWQFIRS PALPESAQWS RLLGYLRPYR GWMIVAVVAM VIGAALGLVM PLAIGQMVNL ITGDQTLPIG RIAVLLGGVA VGQTVAGLIQ NYSLTFVGER VVADLRLAAY QHLQRLDLAF FEQRRTGEIT SRITNDVTLI QSTVTTNLTT LLQGMIQLIG AIALMIVVSW QLSALALVLV PTLVLIAVFF GRWLRRISTT VQDRLADATS ILEETVSGVR VVRSFGREPY EVERFRTAVE ATFAAAMRRA WVRALFQPSM SLAVWATIIG MLVVGGYLVS TGELTPGNLV AFLFYAGIVA GSMGAFAGLF GQVQEALGAV ARVFELLDQQ PAVADAPDAI PLPPVQGRVE FRNVSFAYQR VENGHTAPIV LRNFSLVIEP GEMVALVGPS GAGKSTIVSL IPRFYDVQDG SVLIDGYDVR RVQMQSLRTQ IGIVPQETLL FSGSIRDNIR YGRLDADDAE IEAAARMANA HEFICQLPEG YDTPVGERGV RLSGGQRQRI AIARAILKNP RILILDEATS SLDSESERLV QEALERLMVG RTSIIIAHRL STIRRADRIA VIVAGELMEI GTHRELLTRG GIYARLYELQ FRDPAPVLAV G
|
| |