Gene Cagg_1078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1078 
Symbol 
ID7268530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1333321 
End bp1334160 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content50% 
IMG OID643565923 
ProductTM1410 hypothetical-related protein 
Protein accessionYP_002462428 
Protein GI219847995 
COG category[S] Function unknown 
COG ID[COG3868] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.494543 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGTGC TGCGTTCGTT GTGGTTCGTT GGGTGGGTTG CTCTGTTGCT CGGAGCATGT 
CAGTTGCCGA TGAACGTGCC ATCGTCTTCT TCTCCTACCG TCTCCGCATC AATCGCTCAT
ACGCCTCGAC CCGATTTACC ACAACAGGCG CGTTGGCAGA TTCAATATAC CGGTGATCTG
AAACTCGATC TTGATGTTGA GGTATTTAAT CTCGATTTGT TTGATACGTC ACCGGAGGAT
ATTGCGTTGC TACATCAACG CGGTGTGTTT GTGATGTGCT ATTTTAGTGC AGGCTCGTAT
GAGGATTGGC GTTCTGATGC CCATTTGTTT CCGGCGGACG TGTTGGGAGC AGCAATGGCA
GGTTGGCCAG GTGAACGATG GCTTGACATC CGGCGCGTTG ATCTGTTGAC CCCCATCATG
GAGGCTCGGC TTGATTTGGC GCGAGCGAAA GGGTGTGACG GTGTCGACCC TGATAACGTG
AATGGGTATG TGAATGAGAC CGGCTTTTCC TTGACTGCTG CCGATCAACA ACGCTACAAC
ATCTGGCTCG CTACGGCAGC TCATCAACGA GGGTTGTTCA TTGGACTGAA GAATGATGGT
GAACAGAGCG AAGCATTAGC ACCGTATTTC GATTGGGCAT TGAATGAGTC GTGTTTTTTC
TACGATGAGT GTGATTCGTT GCAGCCTTTT CTCCGCAGCG GGAAGCCGGT TTTTGTGATT
GAATATCATC TCGAACCGGA GTTGTTCTGT GAAACGGCCA ATCAGATGAA TGTCAATGCG
CTTCATAAAC GACGAGACCT CGATGCTTAT CGAGTAGATT GCCGTGAGTG GTCACGCTAA
 
Protein sequence
MHVLRSLWFV GWVALLLGAC QLPMNVPSSS SPTVSASIAH TPRPDLPQQA RWQIQYTGDL 
KLDLDVEVFN LDLFDTSPED IALLHQRGVF VMCYFSAGSY EDWRSDAHLF PADVLGAAMA
GWPGERWLDI RRVDLLTPIM EARLDLARAK GCDGVDPDNV NGYVNETGFS LTAADQQRYN
IWLATAAHQR GLFIGLKNDG EQSEALAPYF DWALNESCFF YDECDSLQPF LRSGKPVFVI
EYHLEPELFC ETANQMNVNA LHKRRDLDAY RVDCREWSR