Gene Cagg_1063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1063 
Symbol 
ID7268515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1312947 
End bp1313528 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content65% 
IMG OID643565908 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_002462413 
Protein GI219847980 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTTC CATCCCACCA CGACCTCATT ACCGGACTTC AACAACGCGA CCCGCGGATG 
GTTAGCGGGA TCTACGAAAC CTACGGGCCG CGCATCTACC ACTACCTGTG CCGGCGCTTG
GGCGATCCCG AACTAGCCCG CGACGCCCAC AGCGACGTGT TTGTCCGCCT GCTCGAACGG
GCCGCCCACT ACCAAGACCG CGGCCTGCCC CTCACCGCGT GGCTCTTCCA CCTCGCCCGC
GATCAGGCCG CCAGCGTGCT GCGCCGTGAT CGGCGGCTTG CCCCGCTCGA AGACGGTGAC
AGTACGCAGA ACGGCGACCC CGAAATGTTG CTCGCCCATC AGTGGGACTG GGAGCACCTC
CAGCAGGTGC TCGCCGCCCT GCCCGACCAC TACCGGCAGG TGCTCTGGCT CCGCTTCGGC
GATGCCCTGT CCCTCGAAGC AACTGCCCAA CAACTCGGTT GCACTGTCTC CGCTGTCAAA
GCGCTCCAAC ACCGGGCGAT GACCCTTGCC TGCAAACTGA TGCGTGAGCA GCAAGAGATC
ATTCCCAACC CACGGCGGAC GTATACCCCG CCGATGGCGT GA
 
Protein sequence
MTVPSHHDLI TGLQQRDPRM VSGIYETYGP RIYHYLCRRL GDPELARDAH SDVFVRLLER 
AAHYQDRGLP LTAWLFHLAR DQAASVLRRD RRLAPLEDGD STQNGDPEML LAHQWDWEHL
QQVLAALPDH YRQVLWLRFG DALSLEATAQ QLGCTVSAVK ALQHRAMTLA CKLMREQQEI
IPNPRRTYTP PMA