Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_1063 |
Symbol | |
ID | 7268515 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | + |
Start bp | 1312947 |
End bp | 1313528 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643565908 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_002462413 |
Protein GI | 219847980 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGTTC CATCCCACCA CGACCTCATT ACCGGACTTC AACAACGCGA CCCGCGGATG GTTAGCGGGA TCTACGAAAC CTACGGGCCG CGCATCTACC ACTACCTGTG CCGGCGCTTG GGCGATCCCG AACTAGCCCG CGACGCCCAC AGCGACGTGT TTGTCCGCCT GCTCGAACGG GCCGCCCACT ACCAAGACCG CGGCCTGCCC CTCACCGCGT GGCTCTTCCA CCTCGCCCGC GATCAGGCCG CCAGCGTGCT GCGCCGTGAT CGGCGGCTTG CCCCGCTCGA AGACGGTGAC AGTACGCAGA ACGGCGACCC CGAAATGTTG CTCGCCCATC AGTGGGACTG GGAGCACCTC CAGCAGGTGC TCGCCGCCCT GCCCGACCAC TACCGGCAGG TGCTCTGGCT CCGCTTCGGC GATGCCCTGT CCCTCGAAGC AACTGCCCAA CAACTCGGTT GCACTGTCTC CGCTGTCAAA GCGCTCCAAC ACCGGGCGAT GACCCTTGCC TGCAAACTGA TGCGTGAGCA GCAAGAGATC ATTCCCAACC CACGGCGGAC GTATACCCCG CCGATGGCGT GA
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Protein sequence | MTVPSHHDLI TGLQQRDPRM VSGIYETYGP RIYHYLCRRL GDPELARDAH SDVFVRLLER AAHYQDRGLP LTAWLFHLAR DQAASVLRRD RRLAPLEDGD STQNGDPEML LAHQWDWEHL QQVLAALPDH YRQVLWLRFG DALSLEATAQ QLGCTVSAVK ALQHRAMTLA CKLMREQQEI IPNPRRTYTP PMA
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