Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_1059 |
Symbol | |
ID | 7268511 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | + |
Start bp | 1309214 |
End bp | 1310476 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643565904 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_002462409 |
Protein GI | 219847976 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCATCGC AACCTTCATC CGCACTGAGC GACATCCGGC TTGGGTTACG CGCCAATTGG GCGCAATTCA GCTTGCTTGT CTTCGTTAAT GCCTTCGTCG GCGGCATGGT CGGCATCGAG CGCACCGTCT TGCCATTGCT GGCCGAAGCT GATTTCGGCA TAGCTTCCAA AACCGCCATC CTGAGTTTCA TCTTCAGCTT TGGGATTGTC AAAGCGCTTG CTAACCTGTT TGCCGGCAGG CTCAGTGATC GCATTGGCCG TAAGAAGGTA CTGGTTACAG GTTGGATCAT CGGTTTGCCG GTGCCGGTGA TCATCATCTT CGCGCCAAGC TGGGAGTGGA TCATCTTTGC GAATGGGTTG CTCGGTATCA ATCAGGGCTT ATGCTGGTCA ACTACTGTCA TCATGAAGAT CGATCTGGTC GGCCCCCAAC AACGCGGTTT AGCCATGGGC ATCAACGAAG CCGCCGGCTA TCTGGCCGTC TCGGCAGCAG CGTTCGGCAC CGGCTACCTT GCTACCACAT ACAGCTTACG CCCGCAACCA TTTATCATTG GGATTATCAT CGCCCTTGCC GGCCTCATCA GCTCGATCTT CTTGGTGCGC GAAACGCAGG GCCATGCCGC CGTTGAAGCG CGCACCCACC ACAACGGTAT GCCGCCCGCC GCACGACTGT CGTTTGCACA CATTCTGCTG CTGACCAGTT GGAAAGATCG CTCGCTCTTC GCGATCAGCC AAGCCGGTAT GTTCAACAAT CTCAACGACG GCATGGCATG GGGTCTCTTT CCGCTCTACT TTGCCCTGCA CGGTCTGTCG ATCGGCGACA TCGGCATCTT GAGCGCAATC TACCCGGCGG TATGGGGGAT CGGCCAACTC GGCGCTGGCG CGCTCTCTGA CCGCGTGGGG CGCAAACCAT TGATCACACT CGGCATGATT GTGCAAGCCG GCGGCATCTT CCTCTTTATC CTGACCTCAG ACTTCTGGAT ATGGGCACTA GGCAGCACCT TGCTCGGCCT CGGCACTGCC CTCGTCTACC CCACCCTTCT CGCCGCCATC GGCGACGTGG CCCACTCCAC ATGGCGCGCT TCAGCAGTCG GGGTCTACCG GCTCTGGCGT GACGGCGGCT ACGCAATCGG CGCGTTGTTA GCCGGCAGTT TAGCCGATGC ACTGGGGATC AGGTGGGCCA TTGGCGCCAC CGGCGGCCTC ACCCTGTTAT CAGGAATCAT CGTCGCCACG GTGATGCGCG AGACTCTGCC GGGACGACGA TGA
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Protein sequence | MPSQPSSALS DIRLGLRANW AQFSLLVFVN AFVGGMVGIE RTVLPLLAEA DFGIASKTAI LSFIFSFGIV KALANLFAGR LSDRIGRKKV LVTGWIIGLP VPVIIIFAPS WEWIIFANGL LGINQGLCWS TTVIMKIDLV GPQQRGLAMG INEAAGYLAV SAAAFGTGYL ATTYSLRPQP FIIGIIIALA GLISSIFLVR ETQGHAAVEA RTHHNGMPPA ARLSFAHILL LTSWKDRSLF AISQAGMFNN LNDGMAWGLF PLYFALHGLS IGDIGILSAI YPAVWGIGQL GAGALSDRVG RKPLITLGMI VQAGGIFLFI LTSDFWIWAL GSTLLGLGTA LVYPTLLAAI GDVAHSTWRA SAVGVYRLWR DGGYAIGALL AGSLADALGI RWAIGATGGL TLLSGIIVAT VMRETLPGRR
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