Gene Cagg_1059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1059 
Symbol 
ID7268511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1309214 
End bp1310476 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content59% 
IMG OID643565904 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002462409 
Protein GI219847976 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATCGC AACCTTCATC CGCACTGAGC GACATCCGGC TTGGGTTACG CGCCAATTGG 
GCGCAATTCA GCTTGCTTGT CTTCGTTAAT GCCTTCGTCG GCGGCATGGT CGGCATCGAG
CGCACCGTCT TGCCATTGCT GGCCGAAGCT GATTTCGGCA TAGCTTCCAA AACCGCCATC
CTGAGTTTCA TCTTCAGCTT TGGGATTGTC AAAGCGCTTG CTAACCTGTT TGCCGGCAGG
CTCAGTGATC GCATTGGCCG TAAGAAGGTA CTGGTTACAG GTTGGATCAT CGGTTTGCCG
GTGCCGGTGA TCATCATCTT CGCGCCAAGC TGGGAGTGGA TCATCTTTGC GAATGGGTTG
CTCGGTATCA ATCAGGGCTT ATGCTGGTCA ACTACTGTCA TCATGAAGAT CGATCTGGTC
GGCCCCCAAC AACGCGGTTT AGCCATGGGC ATCAACGAAG CCGCCGGCTA TCTGGCCGTC
TCGGCAGCAG CGTTCGGCAC CGGCTACCTT GCTACCACAT ACAGCTTACG CCCGCAACCA
TTTATCATTG GGATTATCAT CGCCCTTGCC GGCCTCATCA GCTCGATCTT CTTGGTGCGC
GAAACGCAGG GCCATGCCGC CGTTGAAGCG CGCACCCACC ACAACGGTAT GCCGCCCGCC
GCACGACTGT CGTTTGCACA CATTCTGCTG CTGACCAGTT GGAAAGATCG CTCGCTCTTC
GCGATCAGCC AAGCCGGTAT GTTCAACAAT CTCAACGACG GCATGGCATG GGGTCTCTTT
CCGCTCTACT TTGCCCTGCA CGGTCTGTCG ATCGGCGACA TCGGCATCTT GAGCGCAATC
TACCCGGCGG TATGGGGGAT CGGCCAACTC GGCGCTGGCG CGCTCTCTGA CCGCGTGGGG
CGCAAACCAT TGATCACACT CGGCATGATT GTGCAAGCCG GCGGCATCTT CCTCTTTATC
CTGACCTCAG ACTTCTGGAT ATGGGCACTA GGCAGCACCT TGCTCGGCCT CGGCACTGCC
CTCGTCTACC CCACCCTTCT CGCCGCCATC GGCGACGTGG CCCACTCCAC ATGGCGCGCT
TCAGCAGTCG GGGTCTACCG GCTCTGGCGT GACGGCGGCT ACGCAATCGG CGCGTTGTTA
GCCGGCAGTT TAGCCGATGC ACTGGGGATC AGGTGGGCCA TTGGCGCCAC CGGCGGCCTC
ACCCTGTTAT CAGGAATCAT CGTCGCCACG GTGATGCGCG AGACTCTGCC GGGACGACGA
TGA
 
Protein sequence
MPSQPSSALS DIRLGLRANW AQFSLLVFVN AFVGGMVGIE RTVLPLLAEA DFGIASKTAI 
LSFIFSFGIV KALANLFAGR LSDRIGRKKV LVTGWIIGLP VPVIIIFAPS WEWIIFANGL
LGINQGLCWS TTVIMKIDLV GPQQRGLAMG INEAAGYLAV SAAAFGTGYL ATTYSLRPQP
FIIGIIIALA GLISSIFLVR ETQGHAAVEA RTHHNGMPPA ARLSFAHILL LTSWKDRSLF
AISQAGMFNN LNDGMAWGLF PLYFALHGLS IGDIGILSAI YPAVWGIGQL GAGALSDRVG
RKPLITLGMI VQAGGIFLFI LTSDFWIWAL GSTLLGLGTA LVYPTLLAAI GDVAHSTWRA
SAVGVYRLWR DGGYAIGALL AGSLADALGI RWAIGATGGL TLLSGIIVAT VMRETLPGRR