Gene Cagg_1053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1053 
Symbol 
ID7269321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1303283 
End bp1304239 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content55% 
IMG OID643565898 
ProductD-isomer specific 2-hydroxyacid dehydrogenase NAD-binding 
Protein accessionYP_002462403 
Protein GI219847970 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.728774 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTCG TACTACCCGG TTTATTGCGT GATGAACTCC TTCCCCGTGT GAAAACCGTC 
GCGCCAGAAG CGATCATCGT CTGGTACGAT CAGAACGGTG AACCAGACGC ACCAATTAAC
GATGCAGAGG TCCTGCTTCG CTGGTTTTTT CCCCCCGAAC AGTTAGCCGG CTTTATCCAC
CGTATGCCGG CGCTACGTTG GCTACACATC CCTCGTGCCG GCGTTGATGG TTTACTCATC
CCTGAAGTGA TCGAACGCGA CATCATCGTT ACCAATTCTG CCGGTGTCCA CGCCATACCC
ATCAGCGAAT TCGTAATGCT CTTTGCCCTC AGTCATGTAA AGCAAGCCAC CCATCTACAT
CAATTACAAG CCGCTCATCA GTGGCGAGAA CACGATCTCC AATTACGCGA GCTGGCCGGA
TCAACCATGC TCATCATCGG TCTCGGTCAG ATCGGGCAGG CCATTGCCAC GCGCGCAAGC
GCCTTTGGAA TGCGGGTCTG GGGTTCGCGC CGCACACCAC GCCCGACCAC CGGAGTCGAA
CGGGTGGTGG GTGAAGGGGA ATGGAGGACA TTGCTGCCGG AGGCCGATTT TGTCGTCATC
GCAACTCCAC TAACACCGTT CACCCGTGGC ATGTTTGGGC GAGAGGAACT GGCGCTGATG
AAGCCGGATG CCTACCTGAT CAATATTGCC CGTGGTGAAA TCATTGACGA AACGGCATTG
ATCGAAGCCC TCCGTAATCG TCGGATCGCC GGAGCCGGCC TCGATGTCTT TACCCAAGAG
CCATTGCCCC CCGACAGTCC ATTTTGGACA TTGCCGAATG TCTTTGTGAC GCCACATATC
TCATGGAGTT CTCCGTTTAT CCGTTCCCGT ACCCTTGATC TCTTTATCAC GAACCTGCAC
GCTTTCATCC ACAACGAGCC AATGATCAAC GTGGTTGATA AGCAAGCCGG GTATTGA
 
Protein sequence
MKLVLPGLLR DELLPRVKTV APEAIIVWYD QNGEPDAPIN DAEVLLRWFF PPEQLAGFIH 
RMPALRWLHI PRAGVDGLLI PEVIERDIIV TNSAGVHAIP ISEFVMLFAL SHVKQATHLH
QLQAAHQWRE HDLQLRELAG STMLIIGLGQ IGQAIATRAS AFGMRVWGSR RTPRPTTGVE
RVVGEGEWRT LLPEADFVVI ATPLTPFTRG MFGREELALM KPDAYLINIA RGEIIDETAL
IEALRNRRIA GAGLDVFTQE PLPPDSPFWT LPNVFVTPHI SWSSPFIRSR TLDLFITNLH
AFIHNEPMIN VVDKQAGY