Gene Cagg_1048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1048 
Symbol 
ID7268420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1298341 
End bp1298865 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content56% 
IMG OID643565893 
ProductNADH dehydrogenase subunit B 
Protein accessionYP_002462398 
Protein GI219847965 
COG category[C] Energy production and conversion 
COG ID[COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases 
TIGRFAM ID[TIGR01957] NADH-quinone oxidoreductase, B subunit 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.675921 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAATAG AAGAGAAGGC CGGTAATCTT GGTATTGTCA CAACGACCCT CGAGACGGTC 
GTGAATTGGG GCCGTACAAA TGCGATGTGG CCGTTGTTGT TCGGGTTAGC CTGTTGTGCT
ATCGAGATGA TGGGTGCGCA GGCGAGTAAC TACGACCTCT CACGGTTTGG CATGGAGCTG
AACCGTGCGT CTCCCCGCCA AGCCGATCTG ATGATTGTCG CCGGACGTGT GTCGCGCAAA
ATGGCACCGG TCGTGCGTCG TCTGTACGAT CAGATGCCTG AACCGAAGTG GGTTATCGCC
ATGGGCGATT GTGCGGCATG TGGTGGTATC TTTAACAACT ACGCCATCGT CCAGGGCGTC
GATGAAGTGG TGCCGGTCGA TGTCTATGTC GCCGGTTGCC CGCCGCGCCC CGAAGCCTTG
ATCGATGGCA TTATGATGCT GCATCAGAAA GTGATGCGCG AGAAGCTTAG CGGTAAGAAA
GAAGCGCCGA TCCGCATTGA TCAGCCGCTT GTGCAGGTGA AGTAG
 
Protein sequence
MGIEEKAGNL GIVTTTLETV VNWGRTNAMW PLLFGLACCA IEMMGAQASN YDLSRFGMEL 
NRASPRQADL MIVAGRVSRK MAPVVRRLYD QMPEPKWVIA MGDCAACGGI FNNYAIVQGV
DEVVPVDVYV AGCPPRPEAL IDGIMMLHQK VMREKLSGKK EAPIRIDQPL VQVK