Gene Cagg_1040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1040 
Symbol 
ID7268412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1288860 
End bp1289366 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content52% 
IMG OID643565885 
ProductNADH-ubiquinone/plastoquinone oxidoreductase chain 6 
Protein accessionYP_002462390 
Protein GI219847957 
COG category[C] Energy production and conversion 
COG ID[COG0839] NADH:ubiquinone oxidoreductase subunit 6 (chain J) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTGA TCTTGTTTTT GATTACGGCG CTGATCGCAA TTGTTGGGGC TGTCGCGATG 
GTGGTATCGC GCAACGCGGT TCATAGCGCA CTCTTCCTAC TGCTCAACTT TGCTGCTATT
GCAGTGCTCT TTCTTCTCTT GCATGCCCCA TTTCTCTTCG CGATCCAGCT TACCGTCTAT
GCCGGTGCGA TCATGGTGCT CTTTTTGTTT GTCGTCATGT TATTGGGCGC TGAAAAGGTC
GAAGATGCAC CTGACCGTAT CGCATGGCAG CAGCCGTTGG CTTTAGTGCT TGGTTTGGCG
TTATTGGTCA TAGCGGTTGT GGTTGGTTTA GGCGGTGCTA CTACTCCTCC GCCCGATGGT
GAGGCTCTCG TGCCGTTTAC CGATCCGCGT TCACTGGGTG GATTGCTCTT TACCGATTAT
CTGCTCCCGT TTGAAGTGAC CGGCTTTATT CTGCTTATTG CTGTGGTGGG CGTCGTTGTG
TTGAGTCAGC GCGGGAGGAA GATCTGA
 
Protein sequence
MELILFLITA LIAIVGAVAM VVSRNAVHSA LFLLLNFAAI AVLFLLLHAP FLFAIQLTVY 
AGAIMVLFLF VVMLLGAEKV EDAPDRIAWQ QPLALVLGLA LLVIAVVVGL GGATTPPPDG
EALVPFTDPR SLGGLLFTDY LLPFEVTGFI LLIAVVGVVV LSQRGRKI