Gene Cagg_1036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1036 
Symbol 
ID7268408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1283324 
End bp1284793 
Gene Length1470 bp 
Protein Length489 aa 
Translation table11 
GC content55% 
IMG OID643565881 
Productproton-translocating NADH-quinone oxidoreductase, chain N 
Protein accessionYP_002462386 
Protein GI219847953 
COG category[C] Energy production and conversion 
COG ID[COG1007] NADH:ubiquinone oxidoreductase subunit 2 (chain N) 
TIGRFAM ID[TIGR01770] proton-translocating NADH-quinone oxidoreductase, chain N 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.14168 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTCAT TGACGATCCC ACCGGTGGAT CTACGTTTAC TGGCGCCCCT GTTAGTTGTT 
GTTACATGGG CGACGGTGTT GTTGTTAGTT GATGTGTTCT TCATACCTGA TGGTCGTAAG
AAACTGACCG GCTATCTCGC GATTGGTGGC TTGGTTGTAG CCGGATTGGT CGGTTTGCCG
CTGTGGGGCG TGACCGGTAC GACTTTTGGC GGCATGCTGC GCTTGGATCC GTTTGCGCTC
ACGCTCACAT GGATTTTCCT GCTGATCGGC ATTCTCAGCA TTACAATGTC GTTGGATTAT
TTACCTGGTC AAGGGATCGA GCAGGGCGAG TATTATCCAT TGATCATGTT TGCCGTGAGC
GGGATGATTT TGTTGGCTCA AGGCACCGAT CTGATTGTGC TCTTTTTGGG AATAGAAACT
CTTTCGATTA CGCTGTATAT CTTAACCGGT TTTGCCTACC CGCGACTGAC CTCGGAAGAG
GCAGCGATGA AGTATTTGGT GCTAGGGGCG TTTGCCGCCG GTTTCTTCGT CTACGGGATT
GCTTTGATCT TCGGTGCGAC CGGCTCGACG CGGCTCGGCG AGATCGGGGC CTATGCAGCG
AGCCGCGGTA TCGGTGATCT GAACCTCACG CTCTTGCTCG GTGGGGCGGC AATGGTGCTG
ATCGCCTTCT CGTTCAAAGT GGCGCTTGCA CCTTTCCATA TGTGGACGCC CGATGTCTAT
GAGGGTTCAC CGACGCCGGT GGCGGCGTTT ATGAGCGTTG GTACCAAAGG TGGCGCGCTC
GCAGCCTTGG TGCGGTTGCT CTTTGAGGGC TTGCCTACGC TCAATGAATA CTGGCTACCG
GTGTTGGCCG GGCTGACTGC TCTGACCATG GTCGTTGGTA ATCTCGGTGC GGTGGCGCAG
ACAAATGTAA AGCGGATGCT GGCCTATTCG AGCATTGGTC ATGCCGGTTA TGTGATGCTT
GGGGTGATGG TTGCCGGCGA GCAGCGCGGG CCTGAAGCGT TTCTGTTCTA TATGTTGGTG
TATGCGTTGA GTAATCTTGG TGCGTTTGCC GTACTGATTG CGCTTGAGCA TCAGGGTGAA
AATGCGTGGC GGCTCGATGA TTTTGCCGGC CTGTACCAGC GTCAGCCGCT GTTGGCTGTG
GCTATGGCCA TCTTTATGTT CTCGCTGGCC GGTGTTCCGC CAATGGCCGG ATTTATGGCA
AAGTTCTATG CTCTGACCGC TGCATGGGAA GGTGGTTTAC CCTGGTTGGC ACTGGTCGGG
GTGGTGACGA GCGCGATTGC GGCCTTCTTC TACCTCCGTG TTATTATTCG CATGTTCATG
ACCGAACCGG AAGGCGAACC GACCCCAACC CTAAACCGTG GCCTAACCGT TGATATTGCG
CTTGCTGCAA TTGGGACGAT TGCAATTGGC CTGATTCCGG CGCCAGTCTT TGCACTGGTT
GAGCGGTCAT TGGTAGTGCT TGGTGGATAG
 
Protein sequence
MDSLTIPPVD LRLLAPLLVV VTWATVLLLV DVFFIPDGRK KLTGYLAIGG LVVAGLVGLP 
LWGVTGTTFG GMLRLDPFAL TLTWIFLLIG ILSITMSLDY LPGQGIEQGE YYPLIMFAVS
GMILLAQGTD LIVLFLGIET LSITLYILTG FAYPRLTSEE AAMKYLVLGA FAAGFFVYGI
ALIFGATGST RLGEIGAYAA SRGIGDLNLT LLLGGAAMVL IAFSFKVALA PFHMWTPDVY
EGSPTPVAAF MSVGTKGGAL AALVRLLFEG LPTLNEYWLP VLAGLTALTM VVGNLGAVAQ
TNVKRMLAYS SIGHAGYVML GVMVAGEQRG PEAFLFYMLV YALSNLGAFA VLIALEHQGE
NAWRLDDFAG LYQRQPLLAV AMAIFMFSLA GVPPMAGFMA KFYALTAAWE GGLPWLALVG
VVTSAIAAFF YLRVIIRMFM TEPEGEPTPT LNRGLTVDIA LAAIGTIAIG LIPAPVFALV
ERSLVVLGG