Gene Cagg_1025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1025 
Symbol 
ID7268397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1271266 
End bp1272354 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content57% 
IMG OID643565871 
Productpeptidase M20 
Protein accessionYP_002462376 
Protein GI219847943 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAC TTGCCGAGGA ACTGACCCGT CTGACCTGTG ATCTCATCCG ATTTGAGACG 
ATTGCCGACC GACCTGACCA GTTGCAGGCT GCAATTGATT ATGTTGCCGC ATACGTGGCC
GATCTACCGT CGTTGCACAT TGAACGGAGT AGCGCAGGCG GTAAACCGGC CCTCGTGATG
ACCTTACGAC CTACGCGATC ACCACGGCTC ATACTCAACG GCCACCTTGA TGTCGTCGTA
GGGCAACCAC ATCAATTTAC ACCAGAGATA CGCAACGGCC GCATTTACGG GCGTGGTAGC
CAGGATATGA AAGGTAGTAT TGCGGTCATG CTCCGCCTGA TCCGCGATTT GGCAACCCAA
CCCAACCCAC CCGATGTTGG TTTTCAGTTT GTGACCGATG AGGAGATCGG CGGCCGTCAC
GGCACCGGTC GGCTGCGCGA CGAAGGCTGG AGCTGCGAGT TCATGCTCTG CCTCGAACCA
ACCGATCTCG GCATTTTGTT CGAGCACAAA GGTGGGATGT GGGCCAAACT GCGCTTACCC
GGTCGTGCTG CTCACGGTTC ACGACCATGG GAAGGTGATA ATCCAATCTA TCGGCTGGCC
CGTGGGATCA ATGCGCTGGC CGAACGCTAC CCACCACCCA CCGGCCCCCA CGAATGGCGC
ACCTCGGTAA CACCAACGGA AATTCACGCC GGTGCCGGTT CACGCAACCA AGTACCGGCA
GAGGTGTTCG TTACGTTCGA TATTCGTTGG ACGCCGGATA CAACCCCAGA AGCGATTCAG
GCCGATCTCG CTGCTGTCTT CCCCGATAGT GAGTTTGTAA GTGTGATGGC CAGCGCCGGT
CTCCGCACCG ATCCTGAACA TCACGAAGTT GAACGGATCG CAAACCTGAT CGAACGTCAT
ACCGGCCAAC CACCACGCTT CTACCGCGAA CATTTCGCCA CCGATGCGCG TTACTACTCT
CACCTTGGCA TTCCGGCCAT CTGTCTCGGT CCGGTGGGAG CCGGGTTACA TTCGGCTGAA
GAGTGGGTGG AGATTGCCAG TCTGGTCACG CTCTACCACA TCATTAACGA CTACGTCAAA
AGTATTTAG
 
Protein sequence
MSELAEELTR LTCDLIRFET IADRPDQLQA AIDYVAAYVA DLPSLHIERS SAGGKPALVM 
TLRPTRSPRL ILNGHLDVVV GQPHQFTPEI RNGRIYGRGS QDMKGSIAVM LRLIRDLATQ
PNPPDVGFQF VTDEEIGGRH GTGRLRDEGW SCEFMLCLEP TDLGILFEHK GGMWAKLRLP
GRAAHGSRPW EGDNPIYRLA RGINALAERY PPPTGPHEWR TSVTPTEIHA GAGSRNQVPA
EVFVTFDIRW TPDTTPEAIQ ADLAAVFPDS EFVSVMASAG LRTDPEHHEV ERIANLIERH
TGQPPRFYRE HFATDARYYS HLGIPAICLG PVGAGLHSAE EWVEIASLVT LYHIINDYVK
SI