Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_1024 |
Symbol | |
ID | 7268396 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | + |
Start bp | 1270291 |
End bp | 1271076 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643565870 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_002462375 |
Protein GI | 219847942 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTACGT TCTTGCGACG GGTTGTCTTA CTAACCGGTG CCGGTGGCGG ATTGGGACGC GAGTTTGCTC ACCAACTGTT AGCTGCCGGC GCCGACCTTA TCCTGAGCAG TCACCATCCA CATCGGCTGA CTGCCGCTGC CGAGTTTGCG GCCCACCACC AGACGAGTCC GCATCCCGGT CGCATTCGGG CTTTACTACC GGCAGACTTG AGCGATCCGG CTAGTTGTGA CCGGCTGGCC CAACAGGTGA TGCATGTAGC CCCCGATCTC GATCTGATTA TTCACAACGC CGGCGTCGGT CTGTATGGCC CACTCAATGT TATCCCGCCG GCTGCCATCG AACGTCTCTT ACAGATTAAT CTCCACGCCC CGATCCGACT CACCGCCGCA CTCTTACCGA TGTTGCGCCA TCGTCCTAAC GGACAGATCG TCTTCATCTC GTCGATCCTT GGTCGCGCCG CACTACCCAA TATTAGCGTC TACAGTGCGG CGAAGTTCGG CCTGCGCGGC TTTGCCAGTG GTCTCGCTGC CGACGGCTAT TGCGTCAGTA CGGTTTATCC TTTTTTCACC CAAACCGACA TCCTCGATGC ACCACAGTAT GGCGAAGGCC CGCCACGGCG TGTCCCGCGC TGGTTGGTCG ATCAGCCGCG CCCGGTGGTC CGAGCGAGCC TTGCCGGGAT CGCTGCCCGT CGCCGACATA TCTTTCCTGG TTGGAAAGCA AAACTGTTCG CAGTTGTTGC TGCGGTTGCG CCTGATCTCC TACCACCGTT TAGCCGGCTG GTGTAG
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Protein sequence | MSTFLRRVVL LTGAGGGLGR EFAHQLLAAG ADLILSSHHP HRLTAAAEFA AHHQTSPHPG RIRALLPADL SDPASCDRLA QQVMHVAPDL DLIIHNAGVG LYGPLNVIPP AAIERLLQIN LHAPIRLTAA LLPMLRHRPN GQIVFISSIL GRAALPNISV YSAAKFGLRG FASGLAADGY CVSTVYPFFT QTDILDAPQY GEGPPRRVPR WLVDQPRPVV RASLAGIAAR RRHIFPGWKA KLFAVVAAVA PDLLPPFSRL V
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