Gene Cagg_1024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1024 
Symbol 
ID7268396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1270291 
End bp1271076 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content60% 
IMG OID643565870 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_002462375 
Protein GI219847942 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACGT TCTTGCGACG GGTTGTCTTA CTAACCGGTG CCGGTGGCGG ATTGGGACGC 
GAGTTTGCTC ACCAACTGTT AGCTGCCGGC GCCGACCTTA TCCTGAGCAG TCACCATCCA
CATCGGCTGA CTGCCGCTGC CGAGTTTGCG GCCCACCACC AGACGAGTCC GCATCCCGGT
CGCATTCGGG CTTTACTACC GGCAGACTTG AGCGATCCGG CTAGTTGTGA CCGGCTGGCC
CAACAGGTGA TGCATGTAGC CCCCGATCTC GATCTGATTA TTCACAACGC CGGCGTCGGT
CTGTATGGCC CACTCAATGT TATCCCGCCG GCTGCCATCG AACGTCTCTT ACAGATTAAT
CTCCACGCCC CGATCCGACT CACCGCCGCA CTCTTACCGA TGTTGCGCCA TCGTCCTAAC
GGACAGATCG TCTTCATCTC GTCGATCCTT GGTCGCGCCG CACTACCCAA TATTAGCGTC
TACAGTGCGG CGAAGTTCGG CCTGCGCGGC TTTGCCAGTG GTCTCGCTGC CGACGGCTAT
TGCGTCAGTA CGGTTTATCC TTTTTTCACC CAAACCGACA TCCTCGATGC ACCACAGTAT
GGCGAAGGCC CGCCACGGCG TGTCCCGCGC TGGTTGGTCG ATCAGCCGCG CCCGGTGGTC
CGAGCGAGCC TTGCCGGGAT CGCTGCCCGT CGCCGACATA TCTTTCCTGG TTGGAAAGCA
AAACTGTTCG CAGTTGTTGC TGCGGTTGCG CCTGATCTCC TACCACCGTT TAGCCGGCTG
GTGTAG
 
Protein sequence
MSTFLRRVVL LTGAGGGLGR EFAHQLLAAG ADLILSSHHP HRLTAAAEFA AHHQTSPHPG 
RIRALLPADL SDPASCDRLA QQVMHVAPDL DLIIHNAGVG LYGPLNVIPP AAIERLLQIN
LHAPIRLTAA LLPMLRHRPN GQIVFISSIL GRAALPNISV YSAAKFGLRG FASGLAADGY
CVSTVYPFFT QTDILDAPQY GEGPPRRVPR WLVDQPRPVV RASLAGIAAR RRHIFPGWKA
KLFAVVAAVA PDLLPPFSRL V