Gene Cagg_1013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1013 
Symbol 
ID7268385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1251304 
End bp1252671 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content57% 
IMG OID643565859 
Productprotein of unknown function DUF107 
Protein accessionYP_002462364 
Protein GI219847931 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1030] Membrane-bound serine protease (ClpP class) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCAAC ATCGGTTATC TCCATACCCG ACCCCTCAAT GGCGGTCGGT GTGGCGATAC 
TTCATCATCG GATTGCTCTG GTCGGTATTA GTCACCGGTA TAGCAGCACA GTCAACTCAG
CCAGTCTACG TTGCCGAATA CGAGGGAGTA CTGAGCACGT ATGCCGCCGG ATATTTGCGG
CGTGCCTTGC ACGAAGCTGA GGCTGCGAAT GCTCAGGTAC TAGTGATGCA ACTGACGCCA
CACGGTGCCG TTCTCGAAGA GGTGCGCAAA CTTGCAAACG ATATTGCCAA CGCACGTGTA
CCGGTAGTCG TGTACATCGG TCCATCCGGC CACGATGCCG GGGCAGCCGG TTCGTGGCTG
TTGCCGGCAG CGCACATCGC GGCGATGGCA CCGGATAGTC GGTTTGGCAT TGCCACTCCC
CTCTTCGTAC CGACAATGGG TATGAGCAAT GACACCCAAG AATTGTTGTT AAACGAGCAG
TTACAGCAAT TCGAGGTGTG GGGCCAGGCC CACAACCGCA ATGTTGATTG GGCCGATACC
GCCTTACGGA GCGGTTTTAT TGCAACAGCA GCCCAAGCCA TCGAGGCACA ACCGCCGATT
ATCGATCTGG TGGCCCGTGA CCGTACCGAA TTGTTGCAAC GCCTTGAAGG CCGGGTCGTG
ACATTGGCCG ACGGACGGCA GATCACATTG GCAACACTCG GCGCCCGCCC CTTTGTCGTC
GAAGTCAATC TCCTCGAAGC CTTCCTGATC GTACTCGCCA ATCCGACCGT TGTCTTCTTG
TTATTGATCA TGGCAGGGCT TGCCTTCTAC GCCGAGTTTC TCAGCCCAAC TGTCGGTATC
TTGGCCGGTC TTGGTGTGCT ATTGCTTATT GGCGCAATTA TCGGTATGAT CGCATTGCCG
GTGCAATGGC TCAGCGTGTT AGGCATTCTC ATCGCATTTG GCCTGATTGC AGCCGATCTC
TTCGTGCCAT CGCATGGCAC GCTGACAGTC ATTGGGGTGG GCATTATGAT CGCCAGCGCA
TTAACGCTGT TCGACGCGAC CCAAGCCCCG GGTGTGGTCG TGGCACTGTG GGTGATCATC
TTAGTTGCGA TGATCATTGC AATCTTCGCC GTAACCGGGG TGTGGCTGGC ACTTCGGTCG
CGCAACCGAC CGGTTACGAC CGGGCAGGAA GGGTTAATCG GACGACTGGC TGAGGTACGG
CAGCGCCTCG ACCCAGAAGG GATGGTATTC GTTGAGGGTG CATTGTGGCG AGCGGTATGC
GAGAATGGTA CCGCAGAAGC AGGTGAGTGG GTACGAGTGA CCGGAATCTA TGCCTTGCGC
TTAACGGTGC GGCGGCTTGA ACCATCTGAA TTATCGTCGC CCTCGTAG
 
Protein sequence
MVQHRLSPYP TPQWRSVWRY FIIGLLWSVL VTGIAAQSTQ PVYVAEYEGV LSTYAAGYLR 
RALHEAEAAN AQVLVMQLTP HGAVLEEVRK LANDIANARV PVVVYIGPSG HDAGAAGSWL
LPAAHIAAMA PDSRFGIATP LFVPTMGMSN DTQELLLNEQ LQQFEVWGQA HNRNVDWADT
ALRSGFIATA AQAIEAQPPI IDLVARDRTE LLQRLEGRVV TLADGRQITL ATLGARPFVV
EVNLLEAFLI VLANPTVVFL LLIMAGLAFY AEFLSPTVGI LAGLGVLLLI GAIIGMIALP
VQWLSVLGIL IAFGLIAADL FVPSHGTLTV IGVGIMIASA LTLFDATQAP GVVVALWVII
LVAMIIAIFA VTGVWLALRS RNRPVTTGQE GLIGRLAEVR QRLDPEGMVF VEGALWRAVC
ENGTAEAGEW VRVTGIYALR LTVRRLEPSE LSSPS