Gene Cagg_1005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1005 
Symbol 
ID7268377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1241890 
End bp1244133 
Gene Length2244 bp 
Protein Length747 aa 
Translation table11 
GC content53% 
IMG OID643565853 
ProductPAS/PAC sensor hybrid histidine kinase 
Protein accessionYP_002462358 
Protein GI219847925 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTGGTCA ATCGCGAGCT AGTCATCGGG CAACGCGATG CGCTGCAACA ACTGGAACAC 
GTCTTTGGCG CGCAACCGGA TGCCGTCTTG CTGTCGCGCT TGACCGATGG CGTGTTTGTG
AAAGTCAATC GCAGCTTTAC GACGATCAGC GGATATTCGG CGGAAGAGGT CTTGGGCAAA
GATGGGCTAA CGCTCAATAT CTGGCGTTCG CCGGAAGATC GGCGGCACTG GGCGGAGTTG
ATGCGGCGTG ATGGGTATTG CGTTGGGCTT GAATTCCAAT TCCGCCGGCG CAATGGCGAG
CTGCGCACAT GCTTACTCTC TTCGCAGACC GTGATGATTC GCGGGGTGCC GCATGCGATC
AGCATCATTC ACGACATTAC CGAACGTAAA CAGATCGAGG CAGAACTACA GCGAAGTGAG
GCCCGTTACC GACTAATTGC CGAAAACGCT ACCGACGTGA TCTGGCTGTT CGATCCTGTA
CGGATGCGCT TCACCTTCTT CAGCCCGTCA ATTCACAAGC TGATCGGCTA CTCGGCAGCA
GAAGCGCAGG AGATGTCGTT TGCCGATTTC TTGACTGTCG AGTCGGCCCA GCACGTACAT
TCGGCCTTAC AGTACATGCT CAACCATTGG GAAGGTGATC TGACAACCGC TCCACCGTGG
GTTGCGGAGA TTGACCTGAT CCACCGCGAC GGCCATGTGG TACAGGCCGA AATCATTACC
TCGTTCGTCC GTGATGAAGA GCAGCGGTTA ATAGTACTCG GTGTAGCCCG TGATATTACT
GCCCGCAAGC AAGCCGAAGT AGCATTACGA ATCGCTCGCC AGCAGGCTGA AGCCGCCAAC
CGGGCCAAGA GCGCCTTTTT GGCGAATGTT AGCCACGAAT TACGAACGCC ATTGCACGCC
GTATTAGGGT TTGCCCAGTT GTTGGCAAAC GACAACAACT TAACACCCAC CCAACAGGAG
TATCTAGCGA TTATCAATCG CAGTGGTGAG CACTTACTAC GCCTGATTAA TGAAGTCCTC
GACCTGGCTA AGATCGAAGC CGGACGATAC ACCTATAATG CGGCACCGCT GAATGTGCGC
CAACTCATCG AAGATGTCCA ACTTCTCTTT CGCAACCGCG CCGAAGCCAA GCAATTACAC
TTAAACGTGA CGTGTGCCGG GAATGTACCA ACGCTCATCA TCAGCGATGA GGCAAAGTTA
CGTCAGATTC TGATCAACCT ACTGAGCAAC GCGATCAAGT TTACCGATGT CGGCTCCGTT
CATTTGCACG TTATACGTGA GGAGCAACGC TTGCTCTTTA CTGTAGAAGA TACCGGGATC
GGCATTCCAC CGTTGGATCA GCAAAAGCTC TTCCGGCCCT TCTTCCAAGG TCAGCAAACG
GGGGAATATA ACTCGAGCGT CGGCGTCGGC CTTGGTCTAA GTATTAGCTA CGAACTCGCC
CGACTGATCG GCGGTGATCT GAGTGTGTAC AGTGAGGGAA GAGGTTGTGG TTCCCGCTTT
ACCCTGGTAA TTCCGTTACA AACACCGATC ACCACACCGC TAACCCCGCC CGTTGAAACA
GAACAGCGAC ACGCCATCCG CTTACGCAAC GACCAACCGG TGTATCGTAT GCTGGTAGCC
GATGACCAAC CAACGAATGC GTTGTTCCTC GTCGCGCTCC TGCACCGGCT CGGCTTTGCC
GTCCAATCGG TTGCCGATGG TCAAACGGCA ATCGAGGTTT GGCGCTCGTG GCAACCACAT
ATCATCTGGA TCGATGTCCG TATGCCAAAA CTCAATGGCT TTACCGTTAC CCGGCAGATT
CGGGAAATCT GCGCACGCGA ACCGGGAATG TTACGCCCTT TTATTGTGGC GTTATCGGCC
CATGTGTTTG ATGACACCCC GAAACTCGTC ACCGATGCCG GATGCGACCA TTTCATTGCG
AAGCCGTTTC GTGAACATGA CATTGTGCAG ACGATTGAAC AACTCTTGCA CGTGGAGTTC
GAATACTCGA TACCGATCGC TGACCAATTA CCGACTACAA TAGTGAGCGA TAACGGCTAC
CATCCTGCAT GGTGTAACGC ATTGCAACAA GCAGCCCAAG AGGCCAACTT TCGCCGCTTG
CAAGAATTGG TCCAGCGCAT TGAACGTGAA CGGCCTGCCG ACGCCACTCG CTTACGACAA
TGGATTGAAA CGTTTGATTA TCAATCAGTA TTATCATGGG TTGCGGATGT CACACCATCA
CAAGCCGCAA ATCCTATTGT ATAG
 
Protein sequence
MLVNRELVIG QRDALQQLEH VFGAQPDAVL LSRLTDGVFV KVNRSFTTIS GYSAEEVLGK 
DGLTLNIWRS PEDRRHWAEL MRRDGYCVGL EFQFRRRNGE LRTCLLSSQT VMIRGVPHAI
SIIHDITERK QIEAELQRSE ARYRLIAENA TDVIWLFDPV RMRFTFFSPS IHKLIGYSAA
EAQEMSFADF LTVESAQHVH SALQYMLNHW EGDLTTAPPW VAEIDLIHRD GHVVQAEIIT
SFVRDEEQRL IVLGVARDIT ARKQAEVALR IARQQAEAAN RAKSAFLANV SHELRTPLHA
VLGFAQLLAN DNNLTPTQQE YLAIINRSGE HLLRLINEVL DLAKIEAGRY TYNAAPLNVR
QLIEDVQLLF RNRAEAKQLH LNVTCAGNVP TLIISDEAKL RQILINLLSN AIKFTDVGSV
HLHVIREEQR LLFTVEDTGI GIPPLDQQKL FRPFFQGQQT GEYNSSVGVG LGLSISYELA
RLIGGDLSVY SEGRGCGSRF TLVIPLQTPI TTPLTPPVET EQRHAIRLRN DQPVYRMLVA
DDQPTNALFL VALLHRLGFA VQSVADGQTA IEVWRSWQPH IIWIDVRMPK LNGFTVTRQI
REICAREPGM LRPFIVALSA HVFDDTPKLV TDAGCDHFIA KPFREHDIVQ TIEQLLHVEF
EYSIPIADQL PTTIVSDNGY HPAWCNALQQ AAQEANFRRL QELVQRIERE RPADATRLRQ
WIETFDYQSV LSWVADVTPS QAANPIV