Gene Cagg_0981 details

Gene Information

• Locus tag: Cagg_0981
• ID: 7268353
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chloroflexus aggregans DSM 9485
• Kingdom: Bacteria
• Replicon accession: NC_011831
• Strand: +
• Start bp: 1214928
• End bp: 1215347
• Gene Length: 420 bp
• Protein Length: 139 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 643565830
• Product: methylmalonyl-CoA epimerase
• Protein accession: YP_002462335
• Protein GI: 219847902
• COG category: [E] Amino acid transport and metabolism; [R] General function prediction only
• COG ID: [COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins
• TIGRFAM ID: [TIGR03081] methylmalonyl-CoA epimerase

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0245792
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 14
• Fosmid unclonability p-value: 0.390705
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTTTACTG CGGTCGATCA TATTGGACTG GTGGTAGCCG ATCTGGAATC GGCCATCGAC 
TTTTATCGCA CCGCCTTTGA TGTCACCGAA TGGGAGCGCA TCGAGCTGCC AGAGCGTCAC 
GCTGCGATCG GTGTCGCTCG GTTTGGCGAT ACCCTGATCG AACTGATCGC CCCAACCAGT 
GATCAGGCAA GTTTTGCTCG CTTCCTGCGC GAAAAGGGGC CGGGCATGCA CCATATCGCT 
TACCGTGTTG ATGACATTCA TGCCGCACTC GCCACGCTGC AAGAGCGCGG CCTCCCCCTC 
ATCGATCGTG AGCCTCGCCC AGGTATTCAC GATACGCTCG TCGCATTTGT TCATCCCAAA 
GCCGGCGGGC AGGGAGTGCT TATCGAACTT GTGCAACACC GCACACCACA TCACGCCTGA 

 

Protein sequence

MFTAVDHIGL VVADLESAID FYRTAFDVTE WERIELPERH AAIGVARFGD TLIELIAPTS 
DQASFARFLR EKGPGMHHIA YRVDDIHAAL ATLQERGLPL IDREPRPGIH DTLVAFVHPK 
AGGQGVLIEL VQHRTPHHA