| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_0979 |
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| Symbol | |
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| ID | 7268351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chloroflexus aggregans DSM 9485 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011831 |
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| Strand | + |
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| Start bp | 1211455 |
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| End bp | 1212600 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643565828 |
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| Product | RNA polymerase, sigma 70 subunit, RpoD subfamily |
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| Protein accession | YP_002462333 |
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| Protein GI | 219847900 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02393] RNA polymerase sigma factor RpoD, C-terminal domain
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.048773 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.10867 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGAGC AACTGCTCGC CGCAGCACGG GTGCGCGGGT ACATTACCCA CGCCGACATT
CTTGCTACCT TCCCTAATCC TGAGCACGAC ATTGCCGAGA TCGATCAGTT GTACGCCATG
CTGCAAGCTG AGGGCATTAG GGTTGTCGAG TCAAGTGATG AACTAGACGG TCCGACTGAT
TTTGAACCAG AAACCGATCA CGATTTGACT GTTGATTTGC CCGATCTGGG TGAAATTGCG
TTTGACGATC CGGTACGTAT GTATTTGCAA GAGATCGGGC AAGTTCCTCT ATTGACTGCC
GAGCAAGAGG TTGAATTAGC TAAAGCAATG GAGGCCGGCG CTATTGCCCG TCAACGTCTT
GACCGTGAAG AGTACGCATC AGCACGTGAA CGGTTTGAGT TGGAGCGCGC CGTCCAACAA
GGTCAAGATG CCCGCCACCA TCTGATTCAG GCTAATTTGC GATTGGTTGT GAGTATTGCA
AAGAAATATA CCTCTTATGG CCTGACCATG ATGGATTTGG TGCAGGAAGG TAATATTGGC
CTGATGCGAG CAGTTGAAAA GTTTGATTAT AAGAAGGGCC ATAAGTTCAG TACTTACGCA
ACGTGGTGGA TCCGACAGGC CATTACCCGT GCCATTGCCG ACCAGAGCCG CACGATCCGC
TTGCCGGTTC ATATGGGTGA AGCGATCAGC CAGGTGAAAC GTACTTCCCA TCGCCTCCAG
CAGACGATGC AGCGTGAACC AACACCTGAA GAGATCGCCG ATGCAATGGG CATTTCGGCG
GGTAAAGTAC GCCGCACGCT CGAGGCAAGC ATGCACCCGC TCTCACTTGA GATGCCGGTC
GGTCAAGAGG GCGAAGGGCG CATGGGTGAT TTCATCGAGG ATGATCGCAT CTCGACACCG
GCCGAGGCCG CAGCAGCTTC ATTGCTGCGC GAACAACTCG AAGAGGTGTT GATGAAATTG
CCTGAGCGCG AACGGAAGAT TATTCAGTTG CGCTATGGTT TGAAAGATGG CCGCTACCGC
ACCCTCGAAG AGGTGGGGAT TGAGTTTGGG ATTACCCGCG AACGGATTCG CCAAATCGAA
GCAGTCGCGC TGCGGAAGCT GCGTCATCCC CATTTGGGGA AGAAGCTGCG CGGTTATCTC
GATTAA
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| Protein sequence | MIEQLLAAAR VRGYITHADI LATFPNPEHD IAEIDQLYAM LQAEGIRVVE SSDELDGPTD
FEPETDHDLT VDLPDLGEIA FDDPVRMYLQ EIGQVPLLTA EQEVELAKAM EAGAIARQRL
DREEYASARE RFELERAVQQ GQDARHHLIQ ANLRLVVSIA KKYTSYGLTM MDLVQEGNIG
LMRAVEKFDY KKGHKFSTYA TWWIRQAITR AIADQSRTIR LPVHMGEAIS QVKRTSHRLQ
QTMQREPTPE EIADAMGISA GKVRRTLEAS MHPLSLEMPV GQEGEGRMGD FIEDDRISTP
AEAAAASLLR EQLEEVLMKL PERERKIIQL RYGLKDGRYR TLEEVGIEFG ITRERIRQIE
AVALRKLRHP HLGKKLRGYL D
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