Gene Cagg_0961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0961 
Symbol 
ID7268034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand- 
Start bp1189480 
End bp1190157 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content57% 
IMG OID643565809 
Productputative transcriptional regulator 
Protein accessionYP_002462315 
Protein GI219847882 
COG category[K] Transcription 
COG ID[COG2345] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.189509 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACACA CTCGGTACCC ACCTGATAGT CCGGCCGGTA TGATCTTGTG CTACTTGCAG 
CGCCATGCGC GAGCAACCGT CAAAGAGCTG GCCGATTTAC TCGGCGTCAG CACGACGGCA 
GTGCGCGATC ATTTGGTGCA TCTGCAAGCA GAAGATATGG TCGAAGTGAC CAGTGAGCGC 
AACGGGCCGG GTCGGCCACG GCTGGTTTAT ACCTTGTCGG AAAAAGCGCA GAAGTCCTTC 
CCCAAACAGT ACGATCGCTT GATCAGTACC TTACTGCGCG AGCTGATCGA ACTAGAAGGG 
GAAGGGAAGG TTGAGCAATT GCTCGACCGA GTAAGCAGGC GTTTGGCGAG CGAGTACGCC 
GATCGAATGG CCGGTACCGA TGTGGCTGCT CGGCTCAATG AGCTGCGAGC TTTGCTCGAG 
CAGCGTGGTG TACCGGCCGA GATCGAGCCT GAAGGCGATG TGTTGCGCTT GTTCGCCTGT 
CCGTTCTACG ATGTGGCAGC CGATCATCCT GAGGTCTGTT CGATGGAGCG ACGTATGATC 
GAGTATGTAC TGGGCGAAAA GCTCGTACTC GAGGATACGA TCCGATCCGG CGCACACAAC 
TGTCGCTTCG TGCTGCGCCC GCAGGATATT CCACTGACAT TGACGCCACC GGCTGCTGAT 
GTTAATCCTG ATAGGTAA
 
Protein sequence
MEHTRYPPDS PAGMILCYLQ RHARATVKEL ADLLGVSTTA VRDHLVHLQA EDMVEVTSER 
NGPGRPRLVY TLSEKAQKSF PKQYDRLIST LLRELIELEG EGKVEQLLDR VSRRLASEYA 
DRMAGTDVAA RLNELRALLE QRGVPAEIEP EGDVLRLFAC PFYDVAADHP EVCSMERRMI 
EYVLGEKLVL EDTIRSGAHN CRFVLRPQDI PLTLTPPAAD VNPDR