Gene Cagg_0940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0940 
Symbol 
ID7268013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1169493 
End bp1170605 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content53% 
IMG OID643565788 
ProductNucleotidyl transferase 
Protein accessionYP_002462294 
Protein GI219847861 
COG category[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCAG TAATCCTCGT TGGCGGCCAG GGTACACGTT TGCGTCCGCT CACCTGCCGC 
ACACCCAAAC CAATGCTACC ACTGGTCAAT CAGCCGTTTA TCGAATGGAT GTTGCTCCGA
CTGCGCGATT ACGGCATCCG CGAAGTGATC CTGGCCGTCC AGTATCTGGC CGACCGCTTC
CGTACCGCCC TCGGTGATGG TTCGCATCTC GATATGCGGC TCCACATCGT GGAAGAGCCT
GAACCGCGTG GTACTGCCGG CGCTGTCAAG CACGTCGAAC ATTTACTCGA TGGAACGACG
TTCATTTTTA ACGGCGATGT GATGACCGAT CTCGACCTGA AGGCAATGCT CGATTTTCAC
CGTGAACGGG GCAGTAAAGT AACCATCTCG CTCACGCCGG TTGATGATCC GACCCAATTC
GGTTTGGTTG AGACCGATCG CGACGGACGT GTGCGCCGGT TTCTGGAAAA ACCGCGTCTT
GAGGATATTA CGACCAATTT TGTCAATGCC GGAACGTATC TGATCGAACC TGAGATCTTT
CGCTACGTAC CGCCCAATCA GTTCTATATG TTTGAACGTG GCCTCTTCCC GGTTGTGCTT
CAGACCGGTG ACCCAATGTA CGGTTTTCCA TCGCGCGCCT ACTGGACCGA TATCGGCAAG
CCTCAGACAT ATCTCGATGT GCATCACGAT ATTTTGATCG GCAAAGTTCA GTATCATTTT
CGCGGCCAAC AAGTAGGTGA ACGTATCTGG GTAGAAGGGG AAGTGGATAT TCATGCAAGT
GCTCAAATTG TTGGTCCGGT TGTTATCGGT CACGGCACCC GGATTGGTCG CGGGACACGC
ATTATTGGCC CAACGGTGAT CGGCGAACGG TGTGAAATTG GTCCTGAGTG TCAAATCGAG
GGCGTTGTGA TGTGGGAACG CAACGTGATC GAAGAAGGCG TGACCCTGCG CAATTGTGTA
TTGGGTTCCG GCAACCGGAT CGGTGAGCGA TCGCACATCA TCGATGGCAC GATTATCAGC
GACGAGTGCC ACATTGGACA AGAAAACCGC CTTGAACGCG GTATTCGTAT CTGGCCTGGT
ACGACTCTCG GTGATCGAGC CATCTCGTTT TAG
 
Protein sequence
MKAVILVGGQ GTRLRPLTCR TPKPMLPLVN QPFIEWMLLR LRDYGIREVI LAVQYLADRF 
RTALGDGSHL DMRLHIVEEP EPRGTAGAVK HVEHLLDGTT FIFNGDVMTD LDLKAMLDFH
RERGSKVTIS LTPVDDPTQF GLVETDRDGR VRRFLEKPRL EDITTNFVNA GTYLIEPEIF
RYVPPNQFYM FERGLFPVVL QTGDPMYGFP SRAYWTDIGK PQTYLDVHHD ILIGKVQYHF
RGQQVGERIW VEGEVDIHAS AQIVGPVVIG HGTRIGRGTR IIGPTVIGER CEIGPECQIE
GVVMWERNVI EEGVTLRNCV LGSGNRIGER SHIIDGTIIS DECHIGQENR LERGIRIWPG
TTLGDRAISF