Gene Cagg_0928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0928 
Symbol 
ID7268001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1157249 
End bp1157920 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content53% 
IMG OID643565776 
Productpeptidase M50 
Protein accessionYP_002462282 
Protein GI219847849 
COG category[R] General function prediction only 
COG ID[COG1994] Zn-dependent proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.882812 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGAAACC TAACCTCATT TGATACGATC TTCGATCGAC CCCGCGATGA TACTATCGAG 
CTGCTCAAGG CATGGGCCGG CACGACGTTG GCATTTGCCA TTATGCAAAC CGGTGCCTCG
AACCTGATCA GTGGCGCGTT TGTATTGAAT CTGGTCGTGG CGGCGATTGT GGCCGGGGTT
GGGTTTGTTC TACACGAACT TGCCCATCGC ATTGTCGCGC GTGGGTATGG GGCAGAGGCA
CACTTTATTG CCAACGATCG CTGGCTACTG CTCTCGATTT TGATCAGCTT GTTAGGTATT
TTCATTGCCG CGCCGGGAGC AGTCTGGCAT CGTGGTCTGT TAACCGTGCG GCAGAGTGGG
CTGATCGCTT TAGCCGGCCC GGTTACCAAT CTCGTGTTGT CAATCCTGTT TCTTCTACTG
TTTGTACCGA TCATAGTGTT GCGTCCACCA TTCTTCGATC TGTGGATAAC AGTTTGTTAT
GTTGGATTTC GCTTTAACGC CTGGATTGGC CTGTTCAATA TGATCCCGGC TGGCCCGTTT
GACGGTGCGA AGGTGTTGGC GTGGGATTGG CGAGTCTTTG CCGTCACTGT GGCCGTTGGT
ATTGGCTTGA CCTTCTTGCT GAGTGATAGC ATGATCTTTA GCGTCTTGCA GGCGCTGGTC
CAGATGTTGT AA
 
Protein sequence
MRNLTSFDTI FDRPRDDTIE LLKAWAGTTL AFAIMQTGAS NLISGAFVLN LVVAAIVAGV 
GFVLHELAHR IVARGYGAEA HFIANDRWLL LSILISLLGI FIAAPGAVWH RGLLTVRQSG
LIALAGPVTN LVLSILFLLL FVPIIVLRPP FFDLWITVCY VGFRFNAWIG LFNMIPAGPF
DGAKVLAWDW RVFAVTVAVG IGLTFLLSDS MIFSVLQALV QML