Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_0918 |
Symbol | |
ID | 7267991 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | + |
Start bp | 1144519 |
End bp | 1146453 |
Gene Length | 1935 bp |
Protein Length | 644 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643565766 |
Product | hypothetical protein |
Protein accession | YP_002462272 |
Protein GI | 219847839 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.116546 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCTTAA CGGCTGCTGA AAAGGTCTAT CGCTATTCTT GGCACCGACG CTGGTGGCTC GCGGCAGTCG GCTGGCTGTT CGTTGTGATA AGTTTGTACG GAGCCGGTTT CCAACTGCTC CGTGGTCTCA TGTTCACACC TTTCGCTGCA TGGCTGCGTA GTACCCCATG GCTCCGTCCA CTTTACCAGT GGCTCTCGCC CGCGCCGCGC GATTTGAACG CTTGGCTCGC AGAGGCATTA GTGGTTCTGT TGTGGGCAGC GGTTGGGCTG TGCGTCGCGT TGATCCTCTT CAATGCGTTG CCCACCATTC GGGTGAGCAG TCGTGGCCTA CTGATTGAAT TTGCCGGTGG TTGGCTACCG GTTGCGTGGC AAGATTTAGA TGAGATTCAC GTGACCGGCG ACGAGGCTGG GCTGCGCTTC GTACTTCTGG TGATTCCGGC CAAGACGGCG AAACGGCTTA CCGGTTGGCA CCAGTTGTAT GGGTTGCTAT ACGGAACCAC CATCCGACCG TCCTTCCTCA TTACGTCAAC GATTGATGAC TTCGACCGGT TGCTCAATAC CATCTTGCAA GAGAATAGTC GCGCAATCCG TGCGTTTGAA GGGCGTCAAC CGGTTGTCGT GAATGAGCAA CGTCGTTCAC CATTGTTTAG CGTCTTCCTG CGGGGTAAAC CTGCCGAGAC GTTGCCGGAC GTTGATCTTC CACCCACTAC CATTCCAGAT GTTACCACCT CCTTGCCCGC CTGGTCACTC GTAAGGTTGA CAACCATTGG TACGGCTTGC GTAACATTGA TCGCCGGTCT TGTTCATTAT CGGAGCTACT GGGATCGTGC GCTGACCCTG CTCTTTCCCG ACTTGCGTCG TCAATCCGCT TTCTTGTGGG TAAGCCAAAT CCCTATCTAC AACAAGATAT TTAGTGCCTA CCAGGGGGTT AGCGTCCCCT TGCTCGGTAT TGATGGCCGA CCTGACTTGC CGGCGCCGAT CTGGCTCCTG ATCGCAGCGC ATCTTATGTT GGCATCGGTC ATAATAGCCA TCATTGCGTT GGTTGTTGCG CTACCGGTTG CCGCAACCGC CGGTCAACAG GCTCTGACCA TCCGCTTTGT ACCACGACCG TTGCCATTTA CGCGGTCAAT CCCGTGGAGC CACATCAGTG CGTTCTCCGT GATTGATCTG GGGTTTGGCC ATACTCTGGC GTTTGTTCAA TCGCCGCGAT TACCCTGGCT TTGTCATCTT TGCGGTTTGC TGGTGACCGG ACGGTGGACG GCGGGAACCG TGTTCGTCGG TACGATGCGA CAATGGCCAC AGTTCATCGA GCAATGCGCC GAACGGCTGA GCCACTTACC GCCAATCGAT GAGAAACCAC GTTTTCGACC GTCTGCATTC GTACCAATTG TGCAATTGAT CGGCCAACCG GTAACGACTA TTCGTACTCT CCGCGCCGAT CTAGCGATAG CGAGCAATTC CTCGGCGGAA CATTTGTGGG TAGCAGGGAA GACGATGGCG TTGGTAGCGC TACCCCTCGG CTTGTTATTT ACCGTTCCCA CCCTGCTTCA CGGCGATTGG TGGCCGAGTA GCAACGCCTT GTTTGGTGGC ATTGGATTCT GGATGGCCGG CTTGCTAGAA TGGCCGCTCG TTGGGCTTAT TGCGATGATT ATGTACGGCA CATCTGGTAC TGAGCAAGAG CAGGTATTCG CTCTGTACCC ACGAATCCAG ATGCCACGGC TCTTGCCAAT GTTGCTCGCG CTGGTCAGTT TGCTGATCAA CGTACCATGG CTTGCCGCCC TGTTCTGGTT ACTCGCCCTT GTGATTGCGT ATTGGGTCAC AGCCGCACTC TGGGTTGAGG TATATGAACG GGAAGGCGTG CAGGCTATCA CCGGTGGTTT GTTGCCTGTT GTATGGCAAT TGATAATTAT GCCAGGATTC TGGCTATTGC GCTAA
|
Protein sequence | MSLTAAEKVY RYSWHRRWWL AAVGWLFVVI SLYGAGFQLL RGLMFTPFAA WLRSTPWLRP LYQWLSPAPR DLNAWLAEAL VVLLWAAVGL CVALILFNAL PTIRVSSRGL LIEFAGGWLP VAWQDLDEIH VTGDEAGLRF VLLVIPAKTA KRLTGWHQLY GLLYGTTIRP SFLITSTIDD FDRLLNTILQ ENSRAIRAFE GRQPVVVNEQ RRSPLFSVFL RGKPAETLPD VDLPPTTIPD VTTSLPAWSL VRLTTIGTAC VTLIAGLVHY RSYWDRALTL LFPDLRRQSA FLWVSQIPIY NKIFSAYQGV SVPLLGIDGR PDLPAPIWLL IAAHLMLASV IIAIIALVVA LPVAATAGQQ ALTIRFVPRP LPFTRSIPWS HISAFSVIDL GFGHTLAFVQ SPRLPWLCHL CGLLVTGRWT AGTVFVGTMR QWPQFIEQCA ERLSHLPPID EKPRFRPSAF VPIVQLIGQP VTTIRTLRAD LAIASNSSAE HLWVAGKTMA LVALPLGLLF TVPTLLHGDW WPSSNALFGG IGFWMAGLLE WPLVGLIAMI MYGTSGTEQE QVFALYPRIQ MPRLLPMLLA LVSLLINVPW LAALFWLLAL VIAYWVTAAL WVEVYEREGV QAITGGLLPV VWQLIIMPGF WLLR
|
| |