| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_0905 |
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| Symbol | |
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| ID | 7267978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chloroflexus aggregans DSM 9485 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011831 |
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| Strand | + |
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| Start bp | 1133461 |
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| End bp | 1134546 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643565753 |
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| Product | RNA polymerase, sigma 70 subunit, RpoD subfamily |
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| Protein accession | YP_002462259 |
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| Protein GI | 219847826 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000725553 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000024964 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAAAGCCT TCCCTCAGAA TCATCACCTT GCCGACGGTG AAATTGAACC GGAAGAGACC
GCTGAGGCTG CCGAACTCGA TGCTGAGTGG GATGGCGATG TTGAACTCGA AGCCGAGGAT
GAAGCACTCA TCGAGTCGCT TGAAGACCTC AGCGATGAGA TCGATGTCGA TATCGAGCCG
GTCGAAGATT CGGTACAGCT TTACCTACAG GAGATCGGGC AAGTTCCCCT CCTTACCGCC
GAAGAGGAGG TAGAGCTGGC CCGGCAGTAC CGTCGCGGCA AAGAGGCCCG TCAGCGTTTA
CAAAACGAAG ATTACGCAAA TGACCGCGAG CGGATGCGGC TCGAAATCGA GCAGGCCCGT
GGTGAAGAGG CACGTCGGCG CTTGATTCAG GCTAACTTGC GTCTCGTGGT CAGTGTGGCA
AAGAAATATA TTGGTAGCCC GATGGCTTTC ATGGATTTAG TCCAAGAGGG TAACATCGGT
TTGATGCGGG CAGTTGAGAA GTTTGATTAC ACCAAAGGCA ATCGGTTTAG TACGTATGCC
ACGTGGTGGA TTCGGCAGGC GGTGACGCGC GCAATCGCCG AACAAAGTCG TCTGATTCGC
TTGCCCGTAC ACCTCAGCGA GTCGATTGTT CATCTGCGTC GTGCCATTTA CCGTCTCGAA
CAAGAGCTTG AACGCGAACC GACCCCCGAA GAGCTAGCGC ATGCACTGAA CATGAGCCTA
CGGAAGGTCA AGCGGTTGTT GCGCGCTTCA ACCCAACCGA TCTCGCTCGA ACAACCACTC
AATGCCGATC AAGAGGGTCG GGTGAGCGAG ACTCTTGCCG ACGAGACAGC AGCTTCACCG
ATGGAGATTG CCGAGCAGAA TATGCTACAA GCTGAACTGA ATGCGGCGCT CAACGAGCTA
CCCGAACGCG AACGCAAGAT TTTACAGTTG CGCTACGGTT TGCTCGATGG TCAGCGCCGC
ACTCTCGAAG AGGTTGGTGC TACGTTTGGC ATTACCCGCG AGCGCACACG CCAGATCGAG
GCCGAAGCAC TCCGCCGCTT GCGCCATCCG AGCGTCGGCA ACCGATTGTT CGGCTATCTC
GAATGA
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| Protein sequence | MKAFPQNHHL ADGEIEPEET AEAAELDAEW DGDVELEAED EALIESLEDL SDEIDVDIEP
VEDSVQLYLQ EIGQVPLLTA EEEVELARQY RRGKEARQRL QNEDYANDRE RMRLEIEQAR
GEEARRRLIQ ANLRLVVSVA KKYIGSPMAF MDLVQEGNIG LMRAVEKFDY TKGNRFSTYA
TWWIRQAVTR AIAEQSRLIR LPVHLSESIV HLRRAIYRLE QELEREPTPE ELAHALNMSL
RKVKRLLRAS TQPISLEQPL NADQEGRVSE TLADETAASP MEIAEQNMLQ AELNAALNEL
PERERKILQL RYGLLDGQRR TLEEVGATFG ITRERTRQIE AEALRRLRHP SVGNRLFGYL
E
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